Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene70255 SustainPine v1.1 281
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.50836e-21
Internal
sp_v1.1_unigene70560 SustainPine v1.1 416
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7E9_RICCO 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.47799e-37
Internal
sp_v1.1_unigene70585 SustainPine v1.1 237
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.32963e-13
Internal
sp_v1.1_unigene70722 SustainPine v1.1 276
• AutoFact: PPR domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.09114e-23
Internal
sp_v1.1_unigene70870 SustainPine v1.1 391
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.308e-29
Internal
sp_v1.1_unigene70973 SustainPine v1.1 365
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.94971e-31
Internal
sp_v1.1_unigene71017 SustainPine v1.1 160
• AutoFact: Pentatricopeptide repeat n=1 Tax=Medicago truncatula RepID=Q2HUC1_MEDTR 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene71139 SustainPine v1.1 226
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RBA6_RICCO 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.79364e-11
Putative N-terminus
sp_v1.1_unigene71151 SustainPine v1.1 297
• AutoFact: similar to N. tabacum membrane-associated salt-inducible protein (PID:g473874) [Arabidopsis thaliana] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.21677e-23
Putative N-terminus
sp_v1.1_unigene71270 SustainPine v1.1 310
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.03919e-18
Internal
sp_v1.1_unigene71469 SustainPine v1.1 214
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 9.72561e-17
Internal
sp_v1.1_unigene71536 SustainPine v1.1 256
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.32237e-20
Internal
sp_v1.1_unigene71542 SustainPine v1.1 391
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.03721e-39
Internal
sp_v1.1_unigene71665 SustainPine v1.1 358
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SM23_RICCO 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.36696e-26
Putative N-terminus
sp_v1.1_unigene71898 SustainPine v1.1 290
• AutoFact: Selenium-binding protein-like n=3 Tax=Oryza sativa Japonica Group RepID=Q69WY1_ORYSJ 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.23524e-27
Putative N-terminus
sp_v1.1_unigene71921 SustainPine v1.1 351
• AutoFact: Putative pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S263_ORYSJ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.61687e-35
N-terminus
sp_v1.1_unigene72147 SustainPine v1.1 350
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SRF1_RICCO 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.29158e-28
N-terminus
sp_v1.1_unigene72160 SustainPine v1.1 435
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S7L1_RICCO 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.32133e-18
Putative C-terminus
sp_v1.1_unigene72177 SustainPine v1.1 233
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.91582e-16
Internal
sp_v1.1_unigene72392 SustainPine v1.1 339
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 9.68429e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain