Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene65989 SustainPine v1.1 431
AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.03802e-42
Internal
sp_v1.1_unigene66082 SustainPine v1.1 280
AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 9.39805e-20
Internal
sp_v1.1_unigene66285 SustainPine v1.1 753
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene66554 SustainPine v1.1 492
AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene66660 SustainPine v1.1 610
AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene66703 SustainPine v1.1 228
AutoFact: DOT4; DOT4 (DEFECTIVELY ORGANIZED TRIBUTARIES 4) 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.36633e-18
Putative N-terminus
sp_v1.1_unigene66786 SustainPine v1.1 290
AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.30055e-24
Putative C-terminus
sp_v1.1_unigene66795 SustainPine v1.1 377
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.45592e-40
Internal
sp_v1.1_unigene67073 SustainPine v1.1 557
AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 1.35039e-32
N-terminus
sp_v1.1_unigene67098 SustainPine v1.1 294
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.2911e-20
Internal
sp_v1.1_unigene67128 SustainPine v1.1 322
AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 8.38872e-24
Internal
sp_v1.1_unigene67144 SustainPine v1.1 401
AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
sp_v1.1_unigene67268 SustainPine v1.1 523
AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 1.43978e-26
Internal
sp_v1.1_unigene67338 SustainPine v1.1 223
AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene67342 SustainPine v1.1 450
AutoFact: PGR3; PGR3 (PROTON GRADIENT REGULATION 3) 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.26563e-28
Internal
sp_v1.1_unigene67408 SustainPine v1.1 235
AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.86228e-15
Internal
sp_v1.1_unigene67439 SustainPine v1.1 193
AutoFact: similar to Tetratricopeptide-like helical 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 4.62468e-14
N-terminus
sp_v1.1_unigene67723 SustainPine v1.1 340
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RY68_RICCO 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.8186e-24
Internal
sp_v1.1_unigene67778 SustainPine v1.1 500
AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene67936 SustainPine v1.1 312
AutoFact: Unknown EST 2.0e-18
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain