Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene63500 SustainPine v1.1 373
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v1.1_unigene63512 SustainPine v1.1 406
• AutoFact: Pentatricopeptide repeat-containing protein (Fragment) n=1 Tax=Pitraea cuneato-ovata RepID=D2DHX3_9LAMI 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.10096e-24
Internal
sp_v1.1_unigene63571 SustainPine v1.1 365
• AutoFact: Pentatricopeptide repeat protein PPR1106-17 n=1 Tax=Zea mays RepID=B6SWY6_MAIZE 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 9.07947e-31
Putative N-terminus
sp_v1.1_unigene63584 SustainPine v1.1 362
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide-like helical 5.89268e-38
Internal
sp_v1.1_unigene63609 SustainPine v1.1 269
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.16293e-25
N-terminus
sp_v1.1_unigene63621 SustainPine v1.1 266
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SKC9_RICCO 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.43904e-15
Internal
sp_v1.1_unigene63723 SustainPine v1.1 547
• AutoFact: Pentatricopeptide repeat-containing protein n=2 Tax=Arabidopsis RepID=D7L3A6_ARALY 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.12107e-20
N-terminus
sp_v1.1_unigene63809 SustainPine v1.1 421
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.52806e-28
Internal
sp_v1.1_unigene63810 SustainPine v1.1 265
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.83375e-41
Internal
sp_v1.1_unigene63823 SustainPine v1.1 407
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.56526e-30
Internal
sp_v1.1_unigene63833 SustainPine v1.1 452
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.89116e-16
Internal
sp_v1.1_unigene63925 SustainPine v1.1 393
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.89925e-34
Internal
sp_v1.1_unigene63943 SustainPine v1.1 189
• AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KF69_ARALY 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene64029 SustainPine v1.1 276
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T392_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 7.69768e-30
Internal
sp_v1.1_unigene64033 SustainPine v1.1 347
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.29334e-40
N-terminus
sp_v1.1_unigene64080 SustainPine v1.1 411
• AutoFact: B1358B12.23 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q6MWE3_ORYSJ 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.2039e-44
Internal
sp_v1.1_unigene64140 SustainPine v1.1 480
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene64141 SustainPine v1.1 399
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.68568e-38
Internal
sp_v1.1_unigene65612 SustainPine v1.1 489
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQJ8_RICCO 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.73255e-40
Internal
sp_v1.1_unigene65780 SustainPine v1.1 329
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.51337e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain