Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene6017 SustainPine v1.1 644
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.66421e-15
Putative C-terminus
sp_v1.1_unigene6681 SustainPine v1.1 513
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 91 0.0
Putative N-terminus
sp_v1.1_unigene6770 SustainPine v1.1 771
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 2.04309e-30
C-terminus
sp_v1.1_unigene6772 SustainPine v1.1 1707
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
sp_v1.1_unigene7074 SustainPine v1.1 304
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-22
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.06761e-23
Internal
sp_v1.1_unigene7576 SustainPine v1.1 692
• AutoFact: PPR domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v1.1_unigene8758 SustainPine v1.1 742
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene9411 SustainPine v1.1 577
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene9549 SustainPine v1.1 928
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.8026e-45
Putative C-terminus
sp_v1.1_unigene9883 SustainPine v1.1 1821
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v1.1_unigene9907 SustainPine v1.1 878
• AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH09_RICCO 6.0e-24
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gtp binding 1.04793e-23
Putative C-terminus
sp_v1.1_unigene10059 SustainPine v1.1 615
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 emb|CAB51178.1| putative protein [Arabidopsis thaliana] dbj|BAC42475.1| unknown protein [A 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
sp_v1.1_unigene10066 SustainPine v1.1 1361
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v1.1_unigene10143 SustainPine v1.1 1097
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RXW7_RICCO 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.4013e-45
Internal
sp_v1.1_unigene10447 SustainPine v1.1 1906
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative Complete
sp_v1.1_unigene10470 SustainPine v1.1 1425
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
sp_v1.1_unigene11188 SustainPine v1.1 703
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Putative C-terminus
sp_v1.1_unigene11643 SustainPine v1.1 1099
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene11834 SustainPine v1.1 671
• AutoFact: PPR domain containing protein 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 98 0.0
C-terminus
sp_v1.1_unigene12056 SustainPine v1.1 385
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain