Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene55933 SustainPine v1.1 429
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.714e-36
Internal
sp_v1.1_unigene55939 SustainPine v1.1 444
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: salt-inducible protein 1.8512e-39
Internal
sp_v1.1_unigene55988 SustainPine v1.1 276
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-11
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g23020; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.24963e-14
Internal
sp_v1.1_unigene56053 SustainPine v1.1 512
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g15510, chloroplastic; Flags: Precursor gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsi 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 9.33825e-42
Internal
sp_v1.1_unigene56094 SustainPine v1.1 273
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.49658e-29
Internal
sp_v1.1_unigene56141 SustainPine v1.1 626
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene56214 SustainPine v1.1 581
• AutoFact: Pentatricopeptide repeat-containing protein n=2 Tax=Arabidopsis RepID=D7L3A6_ARALY 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.45735e-43
Internal
sp_v1.1_unigene56224 SustainPine v1.1 499
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.94529e-33
Putative N-terminus
sp_v1.1_unigene56283 SustainPine v1.1 454
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RZM2_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.80391e-26
C-terminus
sp_v1.1_unigene56339 SustainPine v1.1 184
• AutoFact: Pentatricopeptide repeat-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7M2R8_ARALY 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.33693e-20
Internal
sp_v1.1_unigene56374 SustainPine v1.1 366
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.77833e-29
Internal
sp_v1.1_unigene56388 SustainPine v1.1 194
• AutoFact: Pentatricopeptide (PPR) repeat-containing protein-like n=3 Tax=Oryza sativa RepID=Q9LWW0_ORYSJ 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.69641e-14
Internal
sp_v1.1_unigene56441 SustainPine v1.1 456
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.63705e-35
Internal
sp_v1.1_unigene56515 SustainPine v1.1 427
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SBC7_RICCO 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.84648e-32
Internal
sp_v1.1_unigene56529 SustainPine v1.1 600
• AutoFact: pentatricopeptide repeat-containing protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene56548 SustainPine v1.1 564
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.00649e-45
Internal
sp_v1.1_unigene56599 SustainPine v1.1 576
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S8L5_RICCO 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.38781e-22
Putative N-terminus
sp_v1.1_unigene56663 SustainPine v1.1 420
• AutoFact: similar to Tetratricopeptide-like helical 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide-like helical 1.12104e-44
Internal
sp_v1.1_unigene56847 SustainPine v1.1 576
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.61675e-41
Putative N-terminus
sp_v1.1_unigene56890 SustainPine v1.1 453
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.49477e-41
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain