Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene51765 SustainPine v1.1 263
• AutoFact: Pentatricopeptide repeat n=1 Tax=Medicago truncatula RepID=A2Q3R1_MEDTR 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: crp1 protein 3.51482e-14
Internal
sp_v1.1_unigene51766 SustainPine v1.1 203
• AutoFact: Unknown EST 4.0e-29
Putative coding
sp_v1.1_unigene52052 SustainPine v1.1 255
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 8.1597e-11
Putative C-terminus
sp_v1.1_unigene52352 SustainPine v1.1 526
• AutoFact: MEE40; MEE40 (maternal effect embryo arrest 40) 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.09922e-36
C-terminus
sp_v1.1_unigene52610 SustainPine v1.1 383
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.35651e-25
Internal
sp_v1.1_unigene53060 SustainPine v1.1 164
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RV99_RICCO 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene53181 SustainPine v1.1 281
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2W5_RICCO 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 8.47548e-13
Internal
sp_v1.1_unigene53535 SustainPine v1.1 383
• AutoFact: Unknown EST 2.0e-33
Putative coding
sp_v1.1_unigene53558 SustainPine v1.1 253
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.63869e-14
N-terminus
sp_v1.1_unigene53646 SustainPine v1.1 381
• AutoFact: OSJNBa0006B20.5 protein n=2 Tax=Oryza sativa RepID=Q7XV62_ORYSJ 9.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.71986e-29
Internal
sp_v1.1_unigene53744 SustainPine v1.1 420
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-08
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g13770, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 5.05459e-11
Internal
sp_v1.1_unigene53852 SustainPine v1.1 251
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.44093e-16
Internal
sp_v1.1_unigene54028 SustainPine v1.1 352
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2W5_RICCO 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 9.84318e-17
Internal
sp_v1.1_unigene54119 SustainPine v1.1 534
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SS70_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.63111e-42
Internal
sp_v1.1_unigene54128 SustainPine v1.1 793
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene54181 SustainPine v1.1 554
• AutoFact: puative protein [Arabidopsis thaliana] emb|CAB79800.1| puative protein [Arabidopsis thaliana] 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.30584e-43
Putative N-terminus
sp_v1.1_unigene54261 SustainPine v1.1 326
• AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.36671e-34
Putative C-terminus
sp_v1.1_unigene54374 SustainPine v1.1 441
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene54457 SustainPine v1.1 295
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.86715e-16
Internal
sp_v1.1_unigene54578 SustainPine v1.1 477
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQL4_RICCO 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.49976e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain