Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene49524 SustainPine v1.1 517
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g03100, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 9.12637e-24
Internal
sp_v1.1_unigene49770 SustainPine v1.1 278
• AutoFact: CRR2; CRR2 (CHLORORESPIRATORY REDUCTION 2) 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.92433e-27
Internal
sp_v1.1_unigene49801 SustainPine v1.1 237
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene49871 SustainPine v1.1 531
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.05597e-35
Internal
sp_v1.1_unigene49942 SustainPine v1.1 309
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g19525; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene49948 SustainPine v1.1 415
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T4R0_RICCO 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.13735e-33
C-terminus
sp_v1.1_unigene50061 SustainPine v1.1 298
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.83909e-40
Internal
sp_v1.1_unigene50266 SustainPine v1.1 417
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vegetative storage 7.32743e-36
Internal
sp_v1.1_unigene50372 SustainPine v1.1 337
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.66598e-42
Putative N-terminus
sp_v1.1_unigene50381 SustainPine v1.1 336
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.59763e-19
Putative N-terminus
sp_v1.1_unigene50438 SustainPine v1.1 468
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8H7_RICCO 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.24237e-29
Internal
sp_v1.1_unigene50442 SustainPine v1.1 521
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.00649e-45
Internal
sp_v1.1_unigene50647 SustainPine v1.1 430
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.14766e-41
Internal
sp_v1.1_unigene50697 SustainPine v1.1 150
• AutoFact: PPR domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene50851 SustainPine v1.1 373
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.05349e-34
Internal
sp_v1.1_unigene51119 SustainPine v1.1 449
• AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KF69_ARALY 3.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g05670, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: udp-glucoronosyl udp-glucosyl transferase family protein 1.76756e-20
Internal
sp_v1.1_unigene51233 SustainPine v1.1 267
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] emb|CAC01820.1| putative protein [Arabidopsis thaliana] 7.0e-05
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g15010, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene51535 SustainPine v1.1 449
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RV98_RICCO 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.18237e-32
Internal
sp_v1.1_unigene51619 SustainPine v1.1 334
• AutoFact: Unknown EST 9.0e-07
Putative coding
sp_v1.1_unigene51751 SustainPine v1.1 184
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SRS6_RICCO 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain