Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene48062 SustainPine v1.1 338
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 45 1.2176e-35
Internal
sp_v1.1_unigene48103 SustainPine v1.1 349
• AutoFact: Os02g0824000 protein n=4 Tax=Oryza sativa RepID=Q0DWA2_ORYSJ 5.0e-05
• FL-Next: sp=Putative pentatricopeptide repeat-containing protein At5g59900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v1.1_unigene48167 SustainPine v1.1 518
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 79 0.0
N-terminus
sp_v1.1_unigene48367 SustainPine v1.1 430
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S9V6_RICCO 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.97198e-18
Internal
sp_v1.1_unigene48414 SustainPine v1.1 482
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T720_RICCO 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.49172e-14
Internal
sp_v1.1_unigene48429 SustainPine v1.1 402
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.07978e-39
Internal
sp_v1.1_unigene48529 SustainPine v1.1 473
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.11059e-35
Putative N-terminus
sp_v1.1_unigene48620 SustainPine v1.1 426
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGS8_RICCO 9.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.50518e-25
Internal
sp_v1.1_unigene48661 SustainPine v1.1 338
• AutoFact: Putative reverse transcriptase n=1 Tax=Oryza sativa Japonica Group RepID=Q94GP2_ORYSJ 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.02101e-14
Internal
sp_v1.1_unigene48719 SustainPine v1.1 354
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.65783e-30
Internal
sp_v1.1_unigene48862 SustainPine v1.1 391
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene48884 SustainPine v1.1 416
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQ74_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 8.43474e-29
Internal
sp_v1.1_unigene48993 SustainPine v1.1 411
• AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH09_RICCO 3.0e-32
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gtp binding 9.34291e-36
Internal
sp_v1.1_unigene49031 SustainPine v1.1 263
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S6W0_RICCO 0.0001
• FL-Next: sp=Putative pentatricopeptide repeat-containing protein At1g19290; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v1.1_unigene49244 SustainPine v1.1 365
• AutoFact: emb2076 (embryo defective 2076) 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.34913e-26
Internal
sp_v1.1_unigene49269 SustainPine v1.1 214
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9STP1_RICCO 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.10445e-20
Internal
sp_v1.1_unigene49352 SustainPine v1.1 398
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.14662e-44
Internal
sp_v1.1_unigene49406 SustainPine v1.1 498
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 77 6.04712e-35
Internal
sp_v1.1_unigene49418 SustainPine v1.1 436
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T7E9_RICCO 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.3727e-39
Internal
sp_v1.1_unigene49442 SustainPine v1.1 319
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RGG4_RICCO 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.87781e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain