Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene46854 SustainPine v1.1 585
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene46910 SustainPine v1.1 483
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.46126e-40
Internal
sp_v1.1_unigene47043 SustainPine v1.1 258
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SHK0_RICCO 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 8.94865e-26
Internal
sp_v1.1_unigene47063 SustainPine v1.1 299
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.53977e-30
Internal
sp_v1.1_unigene47119 SustainPine v1.1 357
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.58737e-26
Internal
sp_v1.1_unigene47136 SustainPine v1.1 490
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.12367e-43
Internal
sp_v1.1_unigene47156 SustainPine v1.1 255
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.53064e-20
Internal
sp_v1.1_unigene47293 SustainPine v1.1 192
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 4.75962e-11
N-terminus
sp_v1.1_unigene47314 SustainPine v1.1 737
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene47355 SustainPine v1.1 636
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RI03_RICCO 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.15351e-35
Internal
sp_v1.1_unigene47380 SustainPine v1.1 620
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.06957e-17
Putative N-terminus
sp_v1.1_unigene47565 SustainPine v1.1 359
• AutoFact: pentatricopeptide repeat-containing protein, putative 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 2.92718e-29
N-terminus
sp_v1.1_unigene47578 SustainPine v1.1 246
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1C7_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 4.05089e-31
Internal
sp_v1.1_unigene47673 SustainPine v1.1 367
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SCV6_RICCO 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.01276e-14
Internal
sp_v1.1_unigene47678 SustainPine v1.1 438
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.58839e-27
Putative C-terminus
sp_v1.1_unigene47714 SustainPine v1.1 163
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide-like helical 6.17014e-11
Internal
sp_v1.1_unigene47725 SustainPine v1.1 455
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.11106e-19
Internal
sp_v1.1_unigene47814 SustainPine v1.1 421
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.13381e-39
Internal
sp_v1.1_unigene47834 SustainPine v1.1 175
• AutoFact: emb2279 (embryo defective 2279) 8.0e-11
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g30610, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: unnamed protein product [Vitis vinifera] 7.19622e-12
Internal
sp_v1.1_unigene48051 SustainPine v1.1 198
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9ST45_RICCO 7.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.7669e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain