Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene45368 SustainPine v1.1 261
• AutoFact: pentatricopeptide repeat-containing protein, putative 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 8.65729e-13
Internal
sp_v1.1_unigene45392 SustainPine v1.1 687
• AutoFact: pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide-like helical 0.0
Putative Complete
sp_v1.1_unigene45536 SustainPine v1.1 353
• AutoFact: PPR domain containing protein 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.46746e-20
Internal
sp_v1.1_unigene45673 SustainPine v1.1 292
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.57896e-14
Internal
sp_v1.1_unigene45707 SustainPine v1.1 654
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SYJ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
sp_v1.1_unigene45739 SustainPine v1.1 613
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene45909 SustainPine v1.1 161
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene45918 SustainPine v1.1 446
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.8512e-39
C-terminus
sp_v1.1_unigene46037 SustainPine v1.1 322
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.33182e-21
Internal
sp_v1.1_unigene46257 SustainPine v1.1 243
• AutoFact: pentatricopeptide repeat-containing protein, putative 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.34073e-17
Internal
sp_v1.1_unigene46269 SustainPine v1.1 232
• AutoFact: protein kinase family protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at5g21222-like protein 2.68345e-14
Internal
sp_v1.1_unigene46278 SustainPine v1.1 260
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RTM5_RICCO 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.02386e-21
Internal
sp_v1.1_unigene46283 SustainPine v1.1 403
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.7881e-26
Internal
sp_v1.1_unigene46296 SustainPine v1.1 631
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.6544e-37
Putative C-terminus
sp_v1.1_unigene46352 SustainPine v1.1 352
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.57832e-33
Internal
sp_v1.1_unigene46449 SustainPine v1.1 414
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 5.28318e-31
Putative C-terminus
sp_v1.1_unigene46506 SustainPine v1.1 266
• AutoFact: Basic helix-loop-helix-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T2A5_RICCO 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 7.05732e-15
N-terminus
sp_v1.1_unigene46611 SustainPine v1.1 386
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp-glucoronosyl udp-glucosyl transferase family protein 1.18627e-30
Putative C-terminus
sp_v1.1_unigene46696 SustainPine v1.1 336
• AutoFact: pentatricopeptide repeat-containing protein, putative 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.70297e-29
Internal
sp_v1.1_unigene46830 SustainPine v1.1 242
• AutoFact: pentatricopeptide repeat-containing protein, putative 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: udp-glucoronosyl udp-glucosyl transferase family protein 4.23075e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain