Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pentatricopeptide repeat

Term: IPR002885  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene41341 SustainPine v1.1 511
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 3.34458e-15
Internal
sp_v1.1_unigene41573 SustainPine v1.1 528
• AutoFact: Pentatricopeptide, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q9AY70_ORYSJ 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 6.5302e-36
Internal
sp_v1.1_unigene41578 SustainPine v1.1 480
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 6.00036e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.33964e-42
Putative C-terminus
sp_v1.1_unigene41666 SustainPine v1.1 416
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU85_RICCO 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 5.45457e-36
Internal
sp_v1.1_unigene41730 SustainPine v1.1 484
• AutoFact: putatative protein [Arabidopsis thaliana] emb|CAB78921.1| putatative protein [Arabidopsis thaliana] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: putatative protein 0.0
Internal
sp_v1.1_unigene41826 SustainPine v1.1 335
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
Internal
sp_v1.1_unigene41858 SustainPine v1.1 586
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SL84_RICCO 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.13307e-33
N-terminus
sp_v1.1_unigene41940 SustainPine v1.1 907
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.50308e-23
Putative C-terminus
sp_v1.1_unigene42157 SustainPine v1.1 338
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 7.42127e-17
Internal
sp_v1.1_unigene42175 SustainPine v1.1 290
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SBK1_RICCO 9.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.02477e-21
Internal
sp_v1.1_unigene42185 SustainPine v1.1 504
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.67728e-40
Internal
sp_v1.1_unigene42189 SustainPine v1.1 391
• AutoFact: MEE40; MEE40 (maternal effect embryo arrest 40) 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mee40 (maternal effect embryo arrest 40) 1.44514e-12
Internal
sp_v1.1_unigene42489 SustainPine v1.1 609
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3G5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
sp_v1.1_unigene42525 SustainPine v1.1 294
• AutoFact: pentatricopeptide repeat-containing protein, putative 3.0e-19
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g03100, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 6.59455e-21
Internal
sp_v1.1_unigene42580 SustainPine v1.1 318
• AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=A2Q5T1_MEDTR 2.0e-11
• FL-Next: tr=Tetratricopeptide-like helical; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Blast2go: tetratricopeptide-like helical 3.64889e-11
C-terminus
sp_v1.1_unigene42722 SustainPine v1.1 534
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.13535e-34
Internal
sp_v1.1_unigene42746 SustainPine v1.1 434
• AutoFact: pentatricopeptide repeat-containing protein, putative 2.0e-36
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g10690; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 2.91284e-37
Internal
sp_v1.1_unigene42975 SustainPine v1.1 392
• AutoFact: PGR3; PGR3 (PROTON GRADIENT REGULATION 3) 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 8.43303e-29
Internal
sp_v1.1_unigene43157 SustainPine v1.1 411
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RW52_RICCO 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 3.33843e-17
Putative N-terminus
sp_v1.1_unigene43300 SustainPine v1.1 384
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S789_RICCO 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.54741e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain