Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene144 SustainPine v1.1 2236
• AutoFact: zinc finger protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Complete
sp_v1.1_unigene354 SustainPine v1.1 2255
• AutoFact: brca1-associated protein, putative; K10632 BRCA1-associated protein [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: brca1-associated protein 0.0
Complete
sp_v1.1_unigene565 SustainPine v1.1 1235
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 zinc finger protein 0.0
Complete
sp_v1.1_unigene622 SustainPine v1.1 2158
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.2462e-28
Complete
sp_v1.1_unigene650 SustainPine v1.1 1787
• AutoFact: [O] COG5243 HRD ubiquitin ligase complex, ER membrane component 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene883 SustainPine v1.1 1120
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene927 SustainPine v1.1 3031
• AutoFact: ring finger protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Complete
sp_v1.1_unigene1055 SustainPine v1.1 1940
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Putative Complete
sp_v1.1_unigene1139 SustainPine v1.1 1174
• AutoFact: YDG_SRA domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene1211 SustainPine v1.1 1398
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 4.91812e-28
Putative Complete
sp_v1.1_unigene1218 SustainPine v1.1 2708
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
C-terminus
sp_v1.1_unigene1359 SustainPine v1.1 1931
• AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ccch-type zinc finger protein c3h69 0.0
Complete
sp_v1.1_unigene1737 SustainPine v1.1 1812
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 0.0
C-terminus
sp_v1.1_unigene1812 SustainPine v1.1 2071
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family-like protein 0.0
Putative Complete
sp_v1.1_unigene2282 SustainPine v1.1 2184
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_851231.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene2284 SustainPine v1.1 984
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDM6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rhf2a (ring-h2 group f2a) protein binding zinc ion binding 0.0
N-terminus
sp_v1.1_unigene2291 SustainPine v1.1 1762
• AutoFact: ring finger protein, putative 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase At4g11680; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ring finger 0.0
Complete
sp_v1.1_unigene2415 SustainPine v1.1 2449
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene2502 SustainPine v1.1 1512
• AutoFact: ABI3-interacting protein 2-1 n=2 Tax=Triticum aestivum RepID=C0KTZ5_WHEAT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abi3-interacting protein 2-1 protein 0.0
Complete
sp_v1.1_unigene2812 SustainPine v1.1 1025
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain