Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene66043 SustainPine v1.1 443
AutoFact: ring finger protein, putative 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
Internal
sp_v1.1_unigene66234 SustainPine v1.1 477
AutoFact: ring finger protein, putative 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.2726e-24
Internal
sp_v1.1_unigene69681 SustainPine v1.1 391
AutoFact: membrane associated ring finger 1,8, putative 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) family protein 2.8026e-45
Putative N-terminus
sp_v1.1_unigene69860 SustainPine v1.1 448
AutoFact: RING-H2 finger protein ATL3 n=3 Tax=Arabidopsis RepID=ATL3_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 4.28359e-28
Internal
sp_v1.1_unigene70731 SustainPine v1.1 385
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9STH4_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 2.93752e-29
Putative C-terminus
sp_v1.1_unigene74724 SustainPine v1.1 154
AutoFact: zinc finger protein, putative 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 5.47382e-15
Putative C-terminus
sp_v1.1_unigene76156 SustainPine v1.1 750
AutoFact: [O] COG5540 RING-finger-containing ubiquitin ligase 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
Putative Complete
sp_v1.1_unigene77185 SustainPine v1.1 394
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3H0_RICCO 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 1.44237e-23
Putative C-terminus
sp_v1.1_unigene77952 SustainPine v1.1 261
AutoFact: zinc finger protein, putative 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chy and ctchy and ring-type zinc finger protein 1.35927e-28
Internal
sp_v1.1_unigene78276 SustainPine v1.1 773
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
sp_v1.1_unigene79858 SustainPine v1.1 618
AutoFact: ATL4H; ATL4H; protein binding / zinc ion binding 9.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 1 8.61799e-43
Putative Complete
sp_v1.1_unigene80854 SustainPine v1.1 783
AutoFact: zinc finger protein, putative 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.13734e-23
Complete
sp_v1.1_unigene80974 SustainPine v1.1 424
AutoFact: BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g63840 1.48267e-20
Putative N-terminus
sp_v1.1_unigene81259 SustainPine v1.1 239
AutoFact: hyperosmotic protein 21; K03868 RING-box protein 1 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.06914e-19
C-terminus
sp_v1.1_unigene82031 SustainPine v1.1 563
AutoFact: zinc finger (C3HC4-type RING finger) family protein 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain