Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene28835 SustainPine v1.1 435
AutoFact: RHA2A; RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.48793e-33
C-terminus
sp_v1.1_unigene29142 SustainPine v1.1 1037
AutoFact: SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene29426 SustainPine v1.1 1357
AutoFact: zinc finger (C3HC4-type RING finger) family protein 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene30488 SustainPine v1.1 554
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.82047e-35
Putative C-terminus
sp_v1.1_unigene30780 SustainPine v1.1 703
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Complete
sp_v1.1_unigene30813 SustainPine v1.1 526
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein binding 5.40076e-27
N-terminus
sp_v1.1_unigene31431 SustainPine v1.1 519
AutoFact: RING-H2 finger protein ATL3J, putative 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v1.1_unigene32354 SustainPine v1.1 503
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 2.98877e-18
Putative N-terminus
sp_v1.1_unigene33022 SustainPine v1.1 323
AutoFact: ATL3; ATL3; protein binding / zinc ion binding 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Populus trichocarpa] 7.29476e-12
Internal
sp_v1.1_unigene33754 SustainPine v1.1 567
AutoFact: ring finger protein, putative 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 3.22776e-37
N-terminus
sp_v1.1_unigene34235 SustainPine v1.1 2726
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Complete
sp_v1.1_unigene34527 SustainPine v1.1 1056
AutoFact: zinc finger (C3HC4-type RING finger) family protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Complete
sp_v1.1_unigene34862 SustainPine v1.1 522
AutoFact: Zinc finger, RING-type [Medicago truncatula] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene35760 SustainPine v1.1 1172
AutoFact: RHC1A; protein binding / zinc ion binding [Arabidopsis thaliana] ref|NP_973651.1| RHC1A; protein binding / zinc ion binding [Arabidopsis thaliana] ref|NP_973652.1| RHC1A; protein binding / zinc ion binding [Arabidopsis thaliana] gb|AAB86443.1| expressed p 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-related protein 0.0
N-terminus
sp_v1.1_unigene35817 SustainPine v1.1 850
AutoFact: zinc finger (C3HC4-type RING finger) family protein 6.0e-12
FL-Next: sp=RING-H2 finger protein ATL74; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene36202 SustainPine v1.1 1036
AutoFact: GF24775 n=1 Tax=Drosophila ananassae RepID=B3M8F1_DROAN 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v1.1_unigene36782 SustainPine v1.1 547
AutoFact: Ubiquitin-protein ligase bre-1, putative; K10696 E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.63761e-38
C-terminus
sp_v1.1_unigene36915 SustainPine v1.1 318
AutoFact: protein binding / zinc ion binding; K10661 E3 ubiquitin-protein ligase MARCH6 [EC:6.3.2.19] 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.22303e-26
Internal
sp_v1.1_unigene36979 SustainPine v1.1 672
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVA9_RICCO 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 1.64482e-40
Internal
sp_v1.1_unigene37314 SustainPine v1.1 633
AutoFact: RING-H2 finger protein ATL2L 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.48468e-21
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain