Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene20874 SustainPine v1.1 2435
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
Complete
sp_v1.1_unigene21966 SustainPine v1.1 884
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
Complete
sp_v1.1_unigene22000 SustainPine v1.1 984
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 8.56757e-36
Putative N-terminus
sp_v1.1_unigene22277 SustainPine v1.1 701
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.12945e-42
N-terminus
sp_v1.1_unigene22393 SustainPine v1.1 1800
• AutoFact: protein binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene22412 SustainPine v1.1 1495
• AutoFact: similar to thioredoxin-related protein; K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:6.3.2.19] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene22637 SustainPine v1.1 1631
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family-like protein 0.0
Complete
sp_v1.1_unigene23660 SustainPine v1.1 1062
• AutoFact: RING-H2 finger protein ATL3J, putative 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 7.19225e-15
Complete
sp_v1.1_unigene23663 SustainPine v1.1 629
• AutoFact: Avr9/Cf-9 rapidly elicited protein 132 n=1 Tax=Nicotiana tabacum RepID=Q9FQZ7_TOBAC 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 1.26117e-44
Internal
sp_v1.1_unigene24035 SustainPine v1.1 468
• AutoFact: Zinc finger family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KLB6_ARALY 6.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Internal
sp_v1.1_unigene24189 SustainPine v1.1 1451
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 1.4013e-45
• FL-Next: sp=E3 ubiquitin-protein ligase RING1-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene24310 SustainPine v1.1 603
• AutoFact: ring finger protein, putative 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 0.0
C-terminus
sp_v1.1_unigene24409 SustainPine v1.1 1369
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.71042e-41
Putative C-terminus
sp_v1.1_unigene24850 SustainPine v1.1 844
• AutoFact: BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding 2.0e-21
• FL-Next: sp=E3 ubiquitin-protein ligase RHA1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 3.75172e-23
Complete
sp_v1.1_unigene24874 SustainPine v1.1 668
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 3.7918e-40
C-terminus
sp_v1.1_unigene27157 SustainPine v1.1 1059
• AutoFact: zinc finger protein, putative 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene27262 SustainPine v1.1 1812
• AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin-related protein 0.0
Complete
sp_v1.1_unigene27322 SustainPine v1.1 516
• AutoFact: RING-H2 finger protein ATL2I, putative 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.02266e-19
Internal
sp_v1.1_unigene27826 SustainPine v1.1 1108
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
Complete
sp_v1.1_unigene27852 SustainPine v1.1 684
• AutoFact: PHD finger family protein [Arabidopsis thaliana] gb|AAF26130.1|AC011620_6 unknown protein [Arabidopsis thaliana] gb|AAM53309.1| unknown protein [Arabidopsis thaliana] gb|AAO00928.1| unknown protein [Arabidopsis thaliana] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: splicing arginine serine-rich interacting 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain