Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene14044 SustainPine v1.1 1780
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene14427 SustainPine v1.1 962
• AutoFact: [O] COG5574 RING-finger-containing E3 ubiquitin ligase 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.10797e-16
N-terminus
sp_v1.1_unigene15271 SustainPine v1.1 1209
• AutoFact: rnf5, putative; K10666 E3 ubiquitin-protein ligase RNF5 [EC:6.3.2.19] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Complete
sp_v1.1_unigene15528 SustainPine v1.1 1488
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase RING1; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15814 SustainPine v1.1 1563
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] sp|Q9LT17.1|BBR_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER-related; Short=AtBBR dbj|BAB01306.1| unnamed protein product [Arabidopsis thaliana] gb|AAK73948.1| AT3g19910/MPN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
Complete
sp_v1.1_unigene16022 SustainPine v1.1 1850
• AutoFact: Dtx3l, RGD1565144; deltex 3-like (Drosophila); K06058 deltex 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: deltex 3-like 0.0
Complete
sp_v1.1_unigene16190 SustainPine v1.1 1761
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
C-terminus
sp_v1.1_unigene16653 SustainPine v1.1 2761
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Complete
sp_v1.1_unigene16699 SustainPine v1.1 2260
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] sp|Q8GYT9.2|SIS3_ARATH RecName: Full=E3 ubiquitin-protein ligase SIS3; AltName: Full=Protein SUGAR INSENSITIVE 3; Flags: Precursor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene16899 SustainPine v1.1 2013
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZY8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Complete
sp_v1.1_unigene16996 SustainPine v1.1 507
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 7.44103e-28
Internal
sp_v1.1_unigene17184 SustainPine v1.1 2579
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S201_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene17239 SustainPine v1.1 1680
• AutoFact: membrane associated ring finger 1,8, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) family protein 0.0
Complete
sp_v1.1_unigene17414 SustainPine v1.1 789
• AutoFact: Zinc finger family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LM92_ARALY 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 3.00617e-16
C-terminus
sp_v1.1_unigene17667 SustainPine v1.1 1442
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUV3_RICCO 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 2.91207e-31
C-terminus
sp_v1.1_unigene18181 SustainPine v1.1 268
• AutoFact: ring finger protein, putative 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 1.03709e-26
Internal
sp_v1.1_unigene18521 SustainPine v1.1 1691
• AutoFact: ring finger protein, putative 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 5.35296e-43
Putative Complete
sp_v1.1_unigene18688 SustainPine v1.1 1433
• AutoFact: protein binding protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene19118 SustainPine v1.1 1456
• AutoFact: zinc finger (C3HC4-type RING finger) family protein; K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:6.3.2.19] 7.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin-related protein 0.0
Complete
sp_v1.1_unigene19331 SustainPine v1.1 1734
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain