Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene7866 SustainPine v1.1 562
• AutoFact: zinc finger (C3HC4-type RING finger) family protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring zinc finger 0.0
C-terminus
sp_v1.1_unigene8009 SustainPine v1.1 544
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
Internal
sp_v1.1_unigene8118 SustainPine v1.1 1471
• AutoFact: RING finger-like protein [Oryza sativa Japonica Group] dbj|BAB90773.1| RING finger-like protein [Oryza sativa Japonica Group] dbj|BAG89633.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 0.0
Complete
sp_v1.1_unigene8303 SustainPine v1.1 1465
• AutoFact: IBR multi-domain protein 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Putative Complete
sp_v1.1_unigene8469 SustainPine v1.1 2265
• AutoFact: protease-associated zinc finger (C3HC4-type RING finger) family protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Complete
sp_v1.1_unigene8911 SustainPine v1.1 1977
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene8940 SustainPine v1.1 1033
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Putative Complete
sp_v1.1_unigene9154 SustainPine v1.1 1462
• AutoFact: protein binding / zinc ion binding 2.0e-33
• FL-Next: tr=Putative uncharacterized protein Sb04g022820; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: zinc finger family protein 5.97563e-40
Complete
sp_v1.1_unigene9692 SustainPine v1.1 1612
• AutoFact: RING-H2 finger protein ATL1Q, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl1q 0.0
Complete
sp_v1.1_unigene10123 SustainPine v1.1 1214
• AutoFact: binding / protein binding / zinc ion binding 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene10327 SustainPine v1.1 996
• AutoFact: Zinc finger family protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI5_PICAB 1.0e-34
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: zinc finger family protein 2.1431e-34
Complete
sp_v1.1_unigene10516 SustainPine v1.1 981
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] emb|CAB83304.1| putative protein [Arabidopsis thaliana] gb|ACI49777.1| At5g03450 [Arabidopsis thaliana] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger and wd repeat domain 3 1.00583e-20
Putative N-terminus
sp_v1.1_unigene10713 SustainPine v1.1 1378
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 2.8026e-45
N-terminus
sp_v1.1_unigene12341 SustainPine v1.1 2213
• AutoFact: ring finger protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene13073 SustainPine v1.1 886
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI0001982E83 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.98826e-34
Internal
sp_v1.1_unigene13222 SustainPine v1.1 998
• AutoFact: ring finger protein, putative 3.00018e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 8.40779e-45
C-terminus
sp_v1.1_unigene13432 SustainPine v1.1 945
• AutoFact: RING-H2 finger protein ATL3C, putative 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene13580 SustainPine v1.1 2691
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS95_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 0.0
Complete
sp_v1.1_unigene13667 SustainPine v1.1 2160
• AutoFact: zinc finger protein, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger and chy zinc finger domain-containing protein 1 0.0
Complete
sp_v1.1_unigene14020 SustainPine v1.1 565
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 2.04822e-36
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain