Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene224 SustainPine v1.1 3956
• AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
• FL-Next: tr=NMDA receptor-regulated protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v1.1_unigene619 SustainPine v1.1 1291
• AutoFact: FLU, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: flu (fluorescent in blue light) binding 0.0
Complete
sp_v1.1_unigene698 SustainPine v1.1 1766
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Complete
sp_v1.1_unigene1046 SustainPine v1.1 1950
• AutoFact: cell division cycle, putative; K03353 anaphase-promoting complex subunit 6 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cell division 0.0
Complete
sp_v1.1_unigene1259 SustainPine v1.1 2744
• AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene2090 SustainPine v1.1 2364
• AutoFact: CRN (Crooked neck) protein n=1 Tax=Arabidopsis thaliana RepID=Q9FNM3_ARATH 0.0
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Blast2go: crooked neck cell cycle 0.0
Putative C-terminus
sp_v1.1_unigene2256 SustainPine v1.1 3783
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinesin light 0.0
Complete
sp_v1.1_unigene2532 SustainPine v1.1 617
• AutoFact: tetratricopeptide repeat (TPR)-containing protein 0.0
• FL-Next: Isoform 2 of Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 0.0
• Blast2go: binding protein 0.0
Internal
sp_v1.1_unigene3239 SustainPine v1.1 2403
• AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kinesin light 0.0
C-terminus
sp_v1.1_unigene3867 SustainPine v1.1 1019
• AutoFact: TWD1; TWD1 (TWISTED DWARF 1); FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peptidyl-prolyl cis-trans fkbp-type family expressed 0.0
C-terminus
sp_v1.1_unigene4020 SustainPine v1.1 2781
• AutoFact: cell division cycle, putative; K03350 anaphase-promoting complex subunit 3 0.0
• FL-Next: sp=Cell division cycle protein 27 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene4096 SustainPine v1.1 1061
• AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SS47_RICCO 2.0e-39
• FL-Next: tr=O-linked n-acetylglucosamine transferase, ogt, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: o-linked n-acetylglucosamine 6.39462e-40
C-terminus
sp_v1.1_unigene5043 SustainPine v1.1 1526
• AutoFact: Ethylene-overproduction protein 1 n=4 Tax=Arabidopsis RepID=ETO1_ARATH 0.0
• FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene5727 SustainPine v1.1 2283
• AutoFact: Chaperone protein dnaJ, putative; K09527 DnaJ homolog subfamily C member 7 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
Complete
sp_v1.1_unigene6643 SustainPine v1.1 1095
• AutoFact: Pre-mRNA splicing factor, putative n=1 Tax=Ricinus communis RepID=B9RW28_RICCO 0.0
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Blast2go: pre-mrna splicing factor 0.0
Internal
sp_v1.1_unigene7636 SustainPine v1.1 1147
• AutoFact: tetratricopeptide repeat protein, tpr, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat -containing protein 0.0
C-terminus
sp_v1.1_unigene8389 SustainPine v1.1 2957
• AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 0.0
Complete
sp_v1.1_unigene8504 SustainPine v1.1 2905
• AutoFact: VERNALIZATION INDEPENDENCE 6 n=2 Tax=Arabidopsis thaliana RepID=B5X0I6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tpr repeat nuclear 0.0
Complete
sp_v1.1_unigene8824 SustainPine v1.1 879
• AutoFact: o-linked n-acetylglucosamine transferase, ogt, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene8993 SustainPine v1.1 603
• AutoFact: Small glutamine-rich tetratricopeptide repeat-containing protein A, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain