Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Nucleic acid-binding, OB-fold

Term: IPR012340  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene45926 SustainPine v1.1 292
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 2.0e-05
FL-Next: tr=Minichromosome maintenance protein MCM, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna replication licensing factor mcm9-like 4.88564e-32
Internal
sp_v1.1_unigene54017 SustainPine v1.1 182
AutoFact: similar to tRNA synthetase class II (D, K and N) family protein; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] 7.0e-10
FL-Next: tr=Aspartyl-tRNA synthetase; Cucumis melo subsp. melo. 0.0
Internal
sp_v1.1_unigene54563 SustainPine v1.1 665
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pde312 ptac10 0.0
Internal
sp_v1.1_unigene56587 SustainPine v1.1 421
Putative coding
sp_v1.1_unigene58708 SustainPine v1.1 969
AutoFact: Translation initiation factor n=4 Tax=eudicotyledons RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene58817 SustainPine v1.1 696
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 7.83202e-20
Complete
sp_v1.1_unigene58919 SustainPine v1.1 646
AutoFact: Initiation factor 5a, putative n=1 Tax=Ricinus communis RepID=B9RCY4_RICCO 5.0e-11
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a- expressed 4.278e-11
C-terminus
sp_v1.1_unigene59185 SustainPine v1.1 1304
AutoFact: DNA-binding protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene59206 SustainPine v1.1 1046
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene59346 SustainPine v1.1 1259
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene59421 SustainPine v1.1 925
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v1.1_unigene59505 SustainPine v1.1 638
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 6.34382e-20
Complete
sp_v1.1_unigene59666 SustainPine v1.1 890
AutoFact: replication protein-related; K10739 replication factor A2 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a2 0.0
C-terminus
sp_v1.1_unigene60316 SustainPine v1.1 895
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene62292 SustainPine v1.1 425
AutoFact: replication factor A 1, rfa1, putative; K07466 replication factor A1 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: replication factor a 7.09237e-23
N-terminus
sp_v1.1_unigene62645 SustainPine v1.1 394
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: transcription elongation factor spt6 3.90855e-37
Internal
sp_v1.1_unigene68739 SustainPine v1.1 304
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 5.0e-11
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: protein 8.01812e-19
Internal
sp_v1.1_unigene69299 SustainPine v1.1 311
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 5.14716e-26
Putative N-terminus
sp_v1.1_unigene77181 SustainPine v1.1 491
AutoFact: DNA-binding protein-related 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.73265e-27
N-terminus
sp_v1.1_unigene77707 SustainPine v1.1 430
AutoFact: Eukaryotic translation initiation factor 5A 2 n=4 Tax=Spermatophyta RepID=Q3ZDK4_PICAB 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: initiation factor 5.36153e-39
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain