Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Nucleic acid-binding, OB-fold

Term: IPR012340  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene17738 SustainPine v1.1 1655
AutoFact: DNA ligase n=2 Tax=Selaginella moellendorffii RepID=D8RMH0_SELML 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
sp_v1.1_unigene18319 SustainPine v1.1 1130
AutoFact: [J] COG0048 Ribosomal protein S12 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 0.0
Complete
sp_v1.1_unigene18852 SustainPine v1.1 1263
AutoFact: methionyl-tRNA synthetase, putative 0.0
FL-Next: tr=Multisynthetase complex auxiliary component p43; Zea mays (Maize). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene18976 SustainPine v1.1 1291
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog 3; Zea mays (Maize). 0.0
Blast2go: dna replication licensing factor 0.0
N-terminus
sp_v1.1_unigene20269 SustainPine v1.1 757
AutoFact: Rep_fac-A_C domain containing protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 6.09086e-40
Complete
sp_v1.1_unigene20593 SustainPine v1.1 1221
AutoFact: DNA-binding protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene20609 SustainPine v1.1 1116
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9S1L9_RICCO 0.0
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: replication factor a 0.0
Complete
sp_v1.1_unigene20854 SustainPine v1.1 348
AutoFact: replication factor A 1, rfa1, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a 0.0
Putative Complete
sp_v1.1_unigene21045 SustainPine v1.1 1313
AutoFact: Single-stranded DNA-binding protein, mitochondrial precursor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: single-stranded dna-binding mitochondrial 0.0
Complete
sp_v1.1_unigene21160 SustainPine v1.1 742
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 8.8713e-20
Complete
sp_v1.1_unigene21322 SustainPine v1.1 1087
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: eukaryotic translation initiation factor 5a isoform iv 0.0
Complete
sp_v1.1_unigene21488 SustainPine v1.1 1283
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 1.0e-35
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein 2.17125e-35
Complete
sp_v1.1_unigene21740 SustainPine v1.1 853
AutoFact: pollen-specific protein - like [Arabidopsis thaliana] emb|CAB78861.1| pollen-specific protein-like [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22319 SustainPine v1.1 682
AutoFact: replication factor A 1, rfa1, putative; K07466 replication factor A1 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor a 1.34269e-37
N-terminus
sp_v1.1_unigene22684 SustainPine v1.1 1076
AutoFact: Translation initiation factor n=4 Tax=eudicotyledons RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene23655 SustainPine v1.1 455
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 3.22702e-20
Complete
sp_v1.1_unigene24561 SustainPine v1.1 1406
AutoFact: 60S ribosomal protein L8, putative; K02938 large subunit ribosomal protein L8e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene24867 SustainPine v1.1 471
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 1.27479e-16
Putative Complete
sp_v1.1_unigene24905 SustainPine v1.1 541
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 4.05574e-20
Complete
sp_v1.1_unigene24906 SustainPine v1.1 755
AutoFact: 40S ribosomal protein S28; K02979 small subunit ribosomal protein S28e 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 9.06507e-20
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain