Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Nucleic acid-binding, OB-fold

Term: IPR012340  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene8652 SustainPine v1.1 1042
AutoFact: polyribonucleotide nucleotidyltransferase, putative (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Putative C-terminus
sp_v1.1_unigene9778 SustainPine v1.1 1221
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=DNA replication licensing factor MCM3 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene10224 SustainPine v1.1 704
AutoFact: OB fold-containing protein, nucleic acid binding 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
sp_v1.1_unigene10522 SustainPine v1.1 529
AutoFact: 70 kDa subunit of replication protein A n=1 Tax=Ipomoea nil RepID=A6BLP0_IPONI 0.0
FL-Next: tr=70 kDa subunit of replication protein A; Ipomoea nil (Japanese morning glory) (Pharbitis nil). 0.0
Blast2go: replication protein a1 0.0
Internal
sp_v1.1_unigene10719 SustainPine v1.1 1368
AutoFact: PREDICTED: similar to RNA binding / translation initiation factor n=1 Tax=Vitis vinifera RepID=UPI000198501E 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene10795 SustainPine v1.1 1042
AutoFact: emb1129 (embryo defective 1129); structural constituent of ribosome; K02961 small subunit ribosomal protein S17 1.0e-33
FL-Next: sp=30S ribosomal protein S17, chloroplastic; Thalassiosira pseudonana (Marine diatom) (Cyclotella nana). Plastid; Chloroplast. 0.0
Blast2go: 30s ribosomal protein s17 2.44377e-36
Complete
sp_v1.1_unigene11467 SustainPine v1.1 2030
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna replication licensing factor 0.0
N-terminus
sp_v1.1_unigene11559 SustainPine v1.1 888
AutoFact: polyribonucleotide nucleotidyltransferase, putative (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 6.1018e-11
Putative C-terminus
sp_v1.1_unigene12018 SustainPine v1.1 1618
AutoFact: S1 RNA-binding domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene14882 SustainPine v1.1 854
AutoFact: Translation initiation factor n=4 Tax=eudicotyledons RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15545 SustainPine v1.1 1164
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v1.1_unigene15838 SustainPine v1.1 1485
AutoFact: DNA-binding protein-related 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15863 SustainPine v1.1 885
AutoFact: Translation initiation factor n=4 Tax=eudicotyledons RepID=B5M1Y2_RHEAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene16025 SustainPine v1.1 1396
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a2 0.0
Complete
sp_v1.1_unigene16071 SustainPine v1.1 933
AutoFact: Eukaryotic translation initiation factor 5A 4 n=1 Tax=Picea abies RepID=Q3ZDK5_PICAB 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: initiation factor 0.0
Complete
sp_v1.1_unigene16384 SustainPine v1.1 806
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v1.1_unigene16534 SustainPine v1.1 964
AutoFact: 30S ribosomal protein S17, putative n=1 Tax=Ricinus communis RepID=B9RQK5_RICCO 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein 0.0
Complete
sp_v1.1_unigene16945 SustainPine v1.1 982
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene17120 SustainPine v1.1 2537
AutoFact: Lysyl-tRNA synthetase (Fragment) n=3 Tax=Vitis vinifera RepID=D7UB86_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysyl-trna synthetase 0.0
C-terminus
sp_v1.1_unigene17617 SustainPine v1.1 693
AutoFact: DNA-binding protein-related 5.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain