Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Nucleic acid binding, OB-fold, tRNA/helicase-type

Term: IPR004365  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene595 SustainPine v1.1 2298
AutoFact: aspartate-tRNA ligase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartyl-trna aspartate--trna 0.0
Complete
sp_v1.1_unigene3289 SustainPine v1.1 821
AutoFact: cl11267_1; LOC100280726; K07466 replication factor A1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit 0.0
Putative Complete
sp_v1.1_unigene16025 SustainPine v1.1 1396
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a2 0.0
Complete
sp_v1.1_unigene17120 SustainPine v1.1 2537
AutoFact: Lysyl-tRNA synthetase (Fragment) n=3 Tax=Vitis vinifera RepID=D7UB86_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysyl-trna synthetase 0.0
C-terminus
sp_v1.1_unigene20854 SustainPine v1.1 348
AutoFact: replication factor A 1, rfa1, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a 0.0
Putative Complete
sp_v1.1_unigene32224 SustainPine v1.1 597
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Ricinus communis RepID=B9SBP3_RICCO 5.0e-29
FL-Next: sp=Lysyl-tRNA synthetase; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: lysyl-trna synthetase 1.66966e-29
N-terminus
sp_v1.1_unigene59206 SustainPine v1.1 1046
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene59346 SustainPine v1.1 1259
AutoFact: Replication protein A 30 kDa subunit, putative; K10739 replication factor A2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene59666 SustainPine v1.1 890
AutoFact: replication protein-related; K10739 replication factor A2 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a2 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain