Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Tubulin

Term: IPR000217  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene80866 SustainPine v1.1 673
• AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Blast2go: alpha tubulin 1 0.0
Putative C-terminus
sp_v1.1_unigene81044 SustainPine v1.1 969
• AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v1.1_unigene81144 SustainPine v1.1 780
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin alpha 0.0
Putative N-terminus
sp_v1.1_unigene81213 SustainPine v1.1 732
• AutoFact: tubulin alpha chain, putative; K07374 tubulin alpha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
Putative C-terminus
sp_v1.1_unigene81244 SustainPine v1.1 300
• AutoFact: Alpha-tubulin (Fragment) n=3 Tax=Haptophyceae RepID=Q5G913_9EUKA 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-tubulin 2.76277e-27
Internal
sp_v1.1_unigene81270 SustainPine v1.1 372
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin alpha 7.23191e-34
C-terminus
sp_v1.1_unigene81302 SustainPine v1.1 921
• AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Blast2go: alpha tubulin 1 0.0
Internal
sp_v1.1_unigene81490 SustainPine v1.1 540
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin alpha 0.0
N-terminus
sp_v1.1_unigene81543 SustainPine v1.1 472
• AutoFact: Tubulin alpha subunit n=3 Tax=Monocercomonoides sp. PA RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin alpha 0.0
Putative Complete
sp_v1.1_unigene83734 SustainPine v1.1 44
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain