Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Tubulin

Term: IPR000217  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene58728 SustainPine v1.1 1745
• AutoFact: Tubulin beta-2/beta-3 chain n=183 Tax=Embryophyta RepID=TBB2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta-2 beta-3 chain 0.0
Complete
sp_v1.1_unigene59644 SustainPine v1.1 523
• AutoFact: TUBB5, tub5; beta-5 tubulin; K07375 tubulin beta 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-tubulin 2 0.0
Putative N-terminus
sp_v1.1_unigene61175 SustainPine v1.1 623
• AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 1.0e-31
• FL-Next: sp=Tubulin gamma chain; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: gamma tubulin 1.06507e-32
C-terminus
sp_v1.1_unigene63073 SustainPine v1.1 707
• AutoFact: TUB18; tubulin, beta chain; K07375 tubulin beta 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Internal
sp_v1.1_unigene63857 SustainPine v1.1 481
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta 3.32714e-33
C-terminus
sp_v1.1_unigene67253 SustainPine v1.1 404
• AutoFact: Tubulin beta-1 chain (Fragment) n=72 Tax=Eukaryota RepID=TBB1_AVESA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Internal
sp_v1.1_unigene69866 SustainPine v1.1 309
• AutoFact: Beta-6 tubulin (Fragment) n=1 Tax=Geranium dissectum RepID=A3F529_9ROSI 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 1.68895e-31
Internal
sp_v1.1_unigene71557 SustainPine v1.1 410
• AutoFact: Alpha tubulin (Fragment) n=1 Tax=Porphyra yezoensis RepID=Q002F9_PORYE 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene73790 SustainPine v1.1 382
• AutoFact: Cleavage induced tubulin alpha chain n=1 Tax=Phytophthora infestans T30-4 RepID=D0N957_PHYIN 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene75809 SustainPine v1.1 930
• AutoFact: Alpha-2 tubulin (Fragment) n=2 Tax=Magnoliophyta RepID=Q0P6N8_PLAMJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 0.0
C-terminus
sp_v1.1_unigene78156 SustainPine v1.1 379
• AutoFact: alpha tubulin, putative 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Internal
sp_v1.1_unigene79134 SustainPine v1.1 556
• AutoFact: Alpha-2 tubulin (Fragment) n=2 Tax=Magnoliophyta RepID=Q0P6N8_PLAMJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 0.0
C-terminus
sp_v1.1_unigene79345 SustainPine v1.1 1447
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
Complete
sp_v1.1_unigene79792 SustainPine v1.1 734
• AutoFact: Alpha-tubulin 2 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q8MVT1_MYXGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha-tubulin 0.0
Putative C-terminus
sp_v1.1_unigene80025 SustainPine v1.1 419
• AutoFact: tubulin alpha chain, putative; K07374 tubulin alpha 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 0.0
Putative C-terminus
sp_v1.1_unigene80171 SustainPine v1.1 493
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9S382_RICCO 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta-2 beta-3 chain 0.0
Internal
sp_v1.1_unigene80347 SustainPine v1.1 520
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta 0.0
Internal
sp_v1.1_unigene80622 SustainPine v1.1 469
• AutoFact: PREDICTED: tubulin beta-4 chain-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC9DF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Internal
sp_v1.1_unigene80770 SustainPine v1.1 691
• AutoFact: PREDICTED: similar to tubulin, alpha 1 isoform 3 n=1 Tax=Canis lupus familiaris RepID=UPI00005A4BE8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
N-terminus
sp_v1.1_unigene80862 SustainPine v1.1 649
• AutoFact: Tubulin alpha-2/alpha-4 chain n=118 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain