Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Pectin lyase fold/virulence factor

Term: IPR011050  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene69450 SustainPine v1.1 450
• AutoFact: Pectate lyase n=4 Tax=Spiraeoideae RepID=Q6U7H9_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
sp_v1.1_unigene71673 SustainPine v1.1 303
• AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8RAX7_SELML 9.0e-17
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Blast2go: pectin methylesterase 6.18011e-17
Internal
sp_v1.1_unigene74981 SustainPine v1.1 355
• AutoFact: polygalacturonase, putative (EC:3.2.1.15) 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycoside hydrolase family 28 protein polygalacturonase family protein 1.57424e-14
N-terminus
sp_v1.1_unigene76538 SustainPine v1.1 525
• AutoFact: Unassigned protein
Coding
sp_v1.1_unigene78234 SustainPine v1.1 444
• AutoFact: Ripening-related pectate lyase n=1 Tax=Mangifera indica RepID=Q52PJ2_MANIN 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 8.41564e-16
C-terminus
sp_v1.1_unigene80973 SustainPine v1.1 800
• AutoFact: Pectate lyase n=4 Tax=Spiraeoideae RepID=Q6U7H9_MALDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pectate lyase 0.0
Internal
sp_v1.1_unigene83725 SustainPine v1.1 649
• AutoFact: QRT3; QRT3 (QUARTET 3); polygalacturonase 0.0
• FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene89626 SustainPine v1.1 363
• AutoFact: polygalacturonase, putative / pectinase, putative 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.23314e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain