Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene397 SustainPine v1.1 1483
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v1.1_unigene989 SustainPine v1.1 1146
AutoFact: ETL1; ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Putative N-terminus
sp_v1.1_unigene1952 SustainPine v1.1 1069
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf class chromatin remodeling complex protein 0.0
N-terminus
sp_v1.1_unigene6657 SustainPine v1.1 1326
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFD0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene8911 SustainPine v1.1 1977
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 domain-containing protein helicase domain-containing protein ring finger domain-containing protein 0.0
Putative Complete
sp_v1.1_unigene9199 SustainPine v1.1 924
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor 0.0
Putative N-terminus
sp_v1.1_unigene11593 SustainPine v1.1 1048
AutoFact: CHR929; chromatin remodeling complex subunit; K11665 DNA helicase INO80 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene13298 SustainPine v1.1 456
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin remodelling complex atpase chain isw- 0.0
Internal
sp_v1.1_unigene19814 SustainPine v1.1 176
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNX6_RICCO 5.0e-18
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 8.71389e-18
Internal
sp_v1.1_unigene22242 SustainPine v1.1 3918
AutoFact: helicase, putative (EC:2.7.11.1); K11654 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v1.1_unigene22976 SustainPine v1.1 2983
AutoFact: ISWI chromatin remodeling complex ATPase ISW1, putative (EC:2.7.11.1) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v1.1_unigene26736 SustainPine v1.1 1634
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6D4_POPTR 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene27289 SustainPine v1.1 433
AutoFact: ATP binding / DNA binding / helicase/ nucleic acid binding / protein binding / zinc ion binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B02D 1.0e-27
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 2.08996e-27
Internal
sp_v1.1_unigene27971 SustainPine v1.1 859
AutoFact: SYD; SYD (SPLAYED); ATPase/ chromatin binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syd atpase chromatin binding 0.0
Putative N-terminus
sp_v1.1_unigene29612 SustainPine v1.1 3555
AutoFact: helicase, putative (EC:2.7.11.1); K11654 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
sp_v1.1_unigene35247 SustainPine v1.1 364
AutoFact: Chromodomain helicase DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNX6_RICCO 3.0e-37
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 4.92229e-37
Internal
sp_v1.1_unigene38455 SustainPine v1.1 463
AutoFact: SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene38627 SustainPine v1.1 311
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein n=4 Tax=Arabidopsis RepID=Q9M378_ARATH 4.0e-28
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tata-binding protein-associated factor 5.46253e-28
Internal
sp_v1.1_unigene38763 SustainPine v1.1 741
AutoFact: DNA repair helicase rad5,16, putative (EC:2.7.11.1) 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
sp_v1.1_unigene39908 SustainPine v1.1 361
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 5.0e-34
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 9.01084e-34
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain