Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene40840 SustainPine v1.1 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 0.0
Internal
sp_v1.1_unigene45254 SustainPine v1.1 366
AutoFact: CHR1526; SNF2 superfamily RAD5 protein 2.0e-22
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 1.81625e-23
Internal
sp_v1.1_unigene45755 SustainPine v1.1 184
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 1.0e-24
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 2.22222e-24
Internal
sp_v1.1_unigene46019 SustainPine v1.1 339
AutoFact: SYD; SYD (SPLAYED); ATPase/ chromatin binding 1.00053e-42
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: syd atpase chromatin binding 6.01157e-43
Internal
sp_v1.1_unigene47346 SustainPine v1.1 348
AutoFact: DNA helicase INO80 complex homolog 1 n=2 Tax=Arabidopsis RepID=INO80_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v1.1_unigene47535 SustainPine v1.1 295
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKY8_PHYPA 6.0e-35
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 1.72738e-37
Internal
sp_v1.1_unigene52137 SustainPine v1.1 283
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MV63_POPTR 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mutant required to maintain repression 1 4.09946e-23
Internal
sp_v1.1_unigene54073 SustainPine v1.1 350
AutoFact: CHR1547; SNF2 family DNA-dependent ATPase domain-containing protein 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dead-like helicase domain-containing protein 2.58231e-41
Internal
sp_v1.1_unigene58046 SustainPine v1.1 458
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
sp_v1.1_unigene62131 SustainPine v1.1 205
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 2.0e-23
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair and recombination protein 3.15259e-23
Internal
sp_v1.1_unigene63456 SustainPine v1.1 320
AutoFact: Unassigned protein
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Blast2go: chromatin remodeling complex subunit 8.7308e-13
Internal
sp_v1.1_unigene63763 SustainPine v1.1 373
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 2.0e-20
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription regulatory protein 1.68698e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain