Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribonuclease H-like domain

Term: IPR012337  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene46468 SustainPine v1.1 447
AutoFact: Unknown EST 3.0e-13
Putative coding
sp_v1.1_unigene47013 SustainPine v1.1 322
AutoFact: Polyprotein n=1 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-18
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Blast2go: ac069160_10gypsy ty3 element 7.42519e-18
Internal
sp_v1.1_unigene48109 SustainPine v1.1 835
AutoFact: 3-5 exonuclease, putative 2.0e-32
FL-Next: tr=Os05g0357100 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 3 -5 exonuclease domain-containing protein 1.96243e-32
Putative C-terminus
sp_v1.1_unigene48722 SustainPine v1.1 136
AutoFact: Putative transposase n=1 Tax=Arabidopsis thaliana RepID=O81190_ARATH 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene50238 SustainPine v1.1 478
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene50300 SustainPine v1.1 495
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 1.3534e-34
Internal
sp_v1.1_unigene50629 SustainPine v1.1 317
AutoFact: Unassigned protein
FL-Next: tr=OSJNBa0061G20.10 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rnase h family protein 9.63809e-12
Internal
sp_v1.1_unigene50865 SustainPine v1.1 304
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 9.41889e-20
Internal
sp_v1.1_unigene51147 SustainPine v1.1 783
AutoFact: DUF659 domain containing protein 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
sp_v1.1_unigene51217 SustainPine v1.1 436
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retroelement pol polyprotein 9.67784e-25
Internal
sp_v1.1_unigene51774 SustainPine v1.1 230
AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 9.0e-25
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pol protein integrase region 1.6826e-24
Internal
sp_v1.1_unigene51997 SustainPine v1.1 393
AutoFact: Pol protein n=1 Tax=Cucumis melo RepID=Q84KB0_CUCME 3.0e-35
FL-Next: tr=Pol protein; Cucumis melo subsp. melo. 0.0
Blast2go: retrotransposon ty3-gypsy subclass 6.20685e-35
Internal
sp_v1.1_unigene52231 SustainPine v1.1 462
AutoFact: protein dimerization 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dimerization 0.0
Internal
sp_v1.1_unigene52421 SustainPine v1.1 497
AutoFact: Ribonuclease H n=1 Tax=Caldicelulosiruptor becscii DSM 6725 RepID=B9MNG5_ANATD 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v1.1_unigene52695 SustainPine v1.1 473
AutoFact: OSJNBa0094O15.10 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XXJ2_ORYSJ 3.0e-27
FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: retrotransposon unclassified 5.28258e-27
Internal
sp_v1.1_unigene52744 SustainPine v1.1 269
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 7.75737e-22
Internal
sp_v1.1_unigene52955 SustainPine v1.1 423
AutoFact: Ribonuclease H n=1 Tax=uncultured archaeon RepID=D1JH98_9ARCH 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.33348e-13
N-terminus
sp_v1.1_unigene53315 SustainPine v1.1 338
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.11074e-23
Internal
sp_v1.1_unigene53635 SustainPine v1.1 275
AutoFact: Argonaute protein group n=2 Tax=core eudicotyledons RepID=B9N365_POPTR 6.0e-37
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 6.49053e-37
Internal
sp_v1.1_unigene55305 SustainPine v1.1 433
AutoFact: probable exonuclease mut-7 homolog 9.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: at5g24340 4.67205e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain