Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribonuclease H-like domain

Term: IPR012337  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene32066 SustainPine v1.1 428
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5KQK8_ORYSJ 2.0e-28
• FL-Next: tr=Putative uncharacterized protein Sb08g015460; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: hat dimerisation domain-containing 1.71912e-29
Internal
sp_v1.1_unigene32312 SustainPine v1.1 692
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 9.66896e-44
Internal
sp_v1.1_unigene33044 SustainPine v1.1 774
• AutoFact: Copia-type polyprotein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 6.38527e-40
N-terminus
sp_v1.1_unigene33060 SustainPine v1.1 1214
• AutoFact: 3-5 exonuclease, putative 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease 0.0
Complete
sp_v1.1_unigene33160 SustainPine v1.1 464
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 5.41514e-23
Internal
sp_v1.1_unigene33372 SustainPine v1.1 580
• AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 2.0e-37
• FL-Next: tr=Probable integrase-common tobacco-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Blast2go: catalytic region ribonuclease h 2.64185e-37
Putative C-terminus
sp_v1.1_unigene34386 SustainPine v1.1 619
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 3.0e-29
• FL-Next: tr=HAT dimerisation domain-containing protein-like; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: hat dimerisation domain-containing 4.92147e-29
Internal
sp_v1.1_unigene34782 SustainPine v1.1 1343
• AutoFact: ccr4-associated factor, putative (EC:3.1.13.4); K12581 CCR4-NOT transcription complex subunit 7/8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene34887 SustainPine v1.1 531
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 8.40174e-31
Internal
sp_v1.1_unigene34938 SustainPine v1.1 387
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.17664e-30
Internal
sp_v1.1_unigene35083 SustainPine v1.1 695
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 6.0e-38
• FL-Next: tr=HAT family dimerisation domain containing protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: hat dimerisation domain-containing 1.49967e-41
Internal
sp_v1.1_unigene35705 SustainPine v1.1 417
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon gag protein 1.02483e-29
Internal
sp_v1.1_unigene35761 SustainPine v1.1 600
• AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: eukaryotic translation initiation factor 0.0
Internal
sp_v1.1_unigene36230 SustainPine v1.1 976
• AutoFact: Ribonuclease H n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3S3A7_FERPA 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribonuclease h 1.71588e-12
Putative Complete
sp_v1.1_unigene36244 SustainPine v1.1 420
• AutoFact: nuclease, putative 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.8621e-23
Internal
sp_v1.1_unigene36790 SustainPine v1.1 1203
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=A4K7M3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene37373 SustainPine v1.1 427
• AutoFact: Unknown EST 0.0
unknown
sp_v1.1_unigene37384 SustainPine v1.1 484
• AutoFact: Putative hAT dimerisation domain-containing protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6AUA3_ORYSJ 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v1.1_unigene37646 SustainPine v1.1 637
• AutoFact: Pol (Fragment) n=1 Tax=Pisum sativum RepID=Q6WAY9_PEA 7.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein VITISV_026746 [Vitis vinifera] 7.45054e-37
Putative Complete
sp_v1.1_unigene38174 SustainPine v1.1 528
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.89783e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain