Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribonuclease H-like domain

Term: IPR012337  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene25605 SustainPine v1.1 1314
• AutoFact: hATC domain containing protein 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 5.55439e-34
Putative Complete
sp_v1.1_unigene25786 SustainPine v1.1 1420
• AutoFact: ccr4-associated factor, putative (EC:3.1.13.4); K12581 CCR4-NOT transcription complex subunit 7/8 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene26496 SustainPine v1.1 1903
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QVH8_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative Complete
sp_v1.1_unigene26826 SustainPine v1.1 1170
• AutoFact: Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene27115 SustainPine v1.1 267
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10I89_ORYSJ 1.0e-15
• FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: retrotransposon unclassified 2.18368e-16
Internal
sp_v1.1_unigene27691 SustainPine v1.1 1245
• AutoFact: 3-5 exonuclease, putative 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-5 exonuclease nucleic acid binding protein 0.0
Complete
sp_v1.1_unigene29388 SustainPine v1.1 747
• AutoFact: 3-5 exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RFH0_RICCO 9.0e-06
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
C-terminus
sp_v1.1_unigene29493 SustainPine v1.1 635
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-like retrotransposable element 5.84223e-26
C-terminus
sp_v1.1_unigene29712 SustainPine v1.1 916
• AutoFact: rve domain containing protein 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein VITISV_032634 [Vitis vinifera] 0.0
Putative C-terminus
sp_v1.1_unigene29739 SustainPine v1.1 623
• AutoFact: DNA polymerase delta catalytic subunit n=5 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
• FL-Next: sp=DNA polymerase delta catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene29994 SustainPine v1.1 682
• AutoFact: Unassigned protein 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_015895 [Vitis vinifera] 1.40617e-38
Internal
sp_v1.1_unigene30132 SustainPine v1.1 1493
• AutoFact: DUF659 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Putative Complete
sp_v1.1_unigene30335 SustainPine v1.1 487
• AutoFact: Unassigned protein 8.0e-26
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 1.51434e-25
Internal
sp_v1.1_unigene30651 SustainPine v1.1 573
• AutoFact: rve domain containing protein 4.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag pol polyprotein 1.26117e-44
Internal
sp_v1.1_unigene31123 SustainPine v1.1 1314
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) ribonuclease h 4.07098e-35
Putative Complete
sp_v1.1_unigene31336 SustainPine v1.1 887
• AutoFact: rve domain containing protein 5.0e-26
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: hypothetical protein VITISV_037667 [Vitis vinifera] 0.0
Putative Complete
sp_v1.1_unigene31525 SustainPine v1.1 538
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Internal
sp_v1.1_unigene31793 SustainPine v1.1 805
• AutoFact: rve domain containing protein 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_005876 [Vitis vinifera] 0.0
Internal
sp_v1.1_unigene31812 SustainPine v1.1 355
• AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein At2g32420; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rrp6-like protein 3 3.6849e-40
Internal
sp_v1.1_unigene31835 SustainPine v1.1 481
• AutoFact: Ribonuclease H n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3D8_DEHLB 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribonuclease h 1.43899e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain