Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Ribonuclease H-like domain

Term: IPR012337  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene14395 SustainPine v1.1 1936
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
• FL-Next: tr=HAT dimerisation domain-containing protein-like; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: hat dimerisation domain-containing 0.0
Putative N-terminus
sp_v1.1_unigene15405 SustainPine v1.1 893
• AutoFact: ccr4-associated factor, putative (EC:3.1.13.4) 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccr4-associated factor 0.0
N-terminus
sp_v1.1_unigene15584 SustainPine v1.1 1541
• AutoFact: DUF659 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein VITISV_031313 [Vitis vinifera] 0.0
Putative Complete
sp_v1.1_unigene16074 SustainPine v1.1 1454
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hat family dimerisation domain containing protein 2.4161e-25
Putative C-terminus
sp_v1.1_unigene18143 SustainPine v1.1 325
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna binding 1.89983e-20
Internal
sp_v1.1_unigene18971 SustainPine v1.1 730
• AutoFact: DUF659 domain containing protein 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: PREDICTED: hypothetical protein [Vitis vinifera] 0.0
Putative Complete
sp_v1.1_unigene19618 SustainPine v1.1 472
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 1.30948e-29
Internal
sp_v1.1_unigene20002 SustainPine v1.1 1117
• AutoFact: 3_5_exonuc domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: predicted protein [Physcomitrella patens subsp. patens] 1.0195e-40
Complete
sp_v1.1_unigene20330 SustainPine v1.1 251
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hypothetical protein VITISV_041144 [Vitis vinifera] 3.53698e-11
Internal
sp_v1.1_unigene20489 SustainPine v1.1 352
• AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR 1.0e-22
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 2.03925e-22
Internal
sp_v1.1_unigene20539 SustainPine v1.1 863
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9STN2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 0.0
N-terminus
sp_v1.1_unigene20795 SustainPine v1.1 317
• AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 2.0e-16
• FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 3.76573e-16
Internal
sp_v1.1_unigene21385 SustainPine v1.1 219
• AutoFact: Integrase n=1 Tax=Boechera divaricarpa RepID=B6REL8_9BRAS 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.53525e-12
Internal
sp_v1.1_unigene23190 SustainPine v1.1 2324
• AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 exoribonuclease 0.0
Complete
sp_v1.1_unigene23644 SustainPine v1.1 1378
• AutoFact: 3-5 exonuclease, putative 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 -5 exonuclease 0.0
Complete
sp_v1.1_unigene25061 SustainPine v1.1 783
• AutoFact: Ribonuclease H n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3D8_DEHLB 5.0e-08
• FL-Next: tr=OSJNBb0004G23.13 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v1.1_unigene25108 SustainPine v1.1 1323
• AutoFact: rve domain containing protein 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v1.1_unigene25228 SustainPine v1.1 1119
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v1.1_unigene25293 SustainPine v1.1 1486
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene25604 SustainPine v1.1 666
• AutoFact: hATC domain containing protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 6.73676e-39
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain