Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: Ribonuclease H-like domain

Term: IPR012337  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene5449 SustainPine v1.1 753
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 0.0
FL-Next: tr=Integrase, catalytic region; Ribonuclease H; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: catalytic region ribonuclease h 0.0
Internal
sp_v1.1_unigene6073 SustainPine v1.1 2028
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative Complete
sp_v1.1_unigene6275 SustainPine v1.1 680
AutoFact: Ccr4-NOT transcription complex protein (Fragment) n=2 Tax=Pseudotsuga RepID=C6F932_PSEMZ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin assembly factor 1 0.0
C-terminus
sp_v1.1_unigene6332 SustainPine v1.1 1344
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
sp_v1.1_unigene7506 SustainPine v1.1 459
AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 2.0e-31
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: gag pol polyprotein 7.32003e-33
Internal
sp_v1.1_unigene7979 SustainPine v1.1 2045
AutoFact: ccr4-associated factor, putative (EC:3.1.13.4); K12581 CCR4-NOT transcription complex subunit 7/8 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
Complete
sp_v1.1_unigene8415 SustainPine v1.1 653
AutoFact: rve domain containing protein 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v1.1_unigene8954 SustainPine v1.1 1998
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9S921_RICCO 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: eukaryotic translation initiation factor 0.0
C-terminus
sp_v1.1_unigene10156 SustainPine v1.1 745
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 2.0e-36
FL-Next: tr=HAT dimerisation domain-containing protein-like; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: hat dimerisation domain-containing 0.0
Internal
sp_v1.1_unigene10556 SustainPine v1.1 631
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerisation domain containing protein 1.1923e-23
Internal
sp_v1.1_unigene11499 SustainPine v1.1 1431
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
FL-Next: tr=HAT dimerisation domain-containing protein-like; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: hat dimerisation domain-containing 0.0
Internal
sp_v1.1_unigene11743 SustainPine v1.1 1710
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat membrane protein 0.0
Putative C-terminus
sp_v1.1_unigene12157 SustainPine v1.1 1018
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v1.1_unigene12410 SustainPine v1.1 222
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_017862 [Vitis vinifera] 7.30491e-12
Internal
sp_v1.1_unigene12657 SustainPine v1.1 839
AutoFact: Ribonuclease H n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S2S1_THEOJ 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease h 0.0
Putative Complete
sp_v1.1_unigene12809 SustainPine v1.1 628
AutoFact: Ribonuclease H n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3D8_DEHLB 5.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease h 7.89361e-20
N-terminus
sp_v1.1_unigene13696 SustainPine v1.1 970
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene13908 SustainPine v1.1 799
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Putative N-terminus
sp_v1.1_unigene13985 SustainPine v1.1 740
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Internal
sp_v1.1_unigene14299 SustainPine v1.1 412
AutoFact: Oligoribonuclease, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KPH7_CRYNE 9.99967e-42
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 1.92763e-41
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain