Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Putative 5-3 exonuclease

Term: IPR004859  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene127 SustainPine v1.1 3408
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 5 -3 exoribonuclease 2 0.0
Complete
sp_v1.1_unigene1164 SustainPine v1.1 1075
• AutoFact: 5'->3' exoribonuclease, putative; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 5 - 0.0
Internal
sp_v1.1_unigene8612 SustainPine v1.1 507
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9RET3_RICCO 1.0e-15
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 5 - 1.90104e-15
N-terminus
sp_v1.1_unigene8684 SustainPine v1.1 771
• AutoFact: XRN3; XRN3; 5'-3' exoribonuclease; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: 5 -3 exoribonuclease 2 0.0
N-terminus
sp_v1.1_unigene18171 SustainPine v1.1 599
• AutoFact: XRN3; XRN3; 5'-3' exoribonuclease; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Blast2go: 5 -3 exoribonuclease 2 0.0
N-terminus
sp_v1.1_unigene34253 SustainPine v1.1 249
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 3.0e-35
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Blast2go: 5 -3 exoribonuclease 2 5.99363e-35
Internal
sp_v1.1_unigene41772 SustainPine v1.1 800
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 4.0e-29
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Blast2go: 5 -3 exoribonuclease 2 7.10944e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain