Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: Zinc finger, CCHC-type

Term: IPR001878  Help

Source: InterPro from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene49950 SustainPine v1.1 377
• AutoFact: Unknown EST 6.0e-31
Coding
sp_v1.1_unigene50074 SustainPine v1.1 90
• AutoFact: Unknown EST 3.0e-11
unknown
sp_v1.1_unigene50314 SustainPine v1.1 203
• AutoFact: zf-CCHC domain containing protein 6.0e-05
Coding
sp_v1.1_unigene50487 SustainPine v1.1 336
• AutoFact: Zinc finger, CCHC-type n=1 Tax=Medicago truncatula RepID=A2Q169_MEDTR 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene50598 SustainPine v1.1 434
• AutoFact: Unknown EST 6.0e-17
unknown
sp_v1.1_unigene51106 SustainPine v1.1 316
• AutoFact: Unknown EST 3.0e-19
Coding
sp_v1.1_unigene52117 SustainPine v1.1 282
• AutoFact: zf-CCHC domain containing protein 0.0001
Putative coding
sp_v1.1_unigene52554 SustainPine v1.1 545
• AutoFact: Putative coat protein n=1 Tax=Blueberry red ringspot virus RepID=Q919G4_9VIRU 5.0e-05
Coding
sp_v1.1_unigene55093 SustainPine v1.1 416
• AutoFact: H0102C09.1 protein n=1 Tax=Oryza sativa RepID=Q25AL5_ORYSA 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene56092 SustainPine v1.1 476
• AutoFact: Unknown EST 2.0e-13
unknown
sp_v1.1_unigene58379 SustainPine v1.1 631
• AutoFact: CYP59; CYP59 (CYCLOPHILIN 59); RNA binding / nucleic acid binding / peptidyl-prolyl cis-trans isomerase; K12735 peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v1.1_unigene62057 SustainPine v1.1 479
• AutoFact: zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana] emb|CAC05633.1| putative protein [Arabidopsis thaliana] gb|AAM20675.1| putative protein [Arabidopsis thaliana] gb|AAN72214.1| putative protein [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene65301 SustainPine v1.1 293
• AutoFact: Unknown EST 2.0e-06
unknown
sp_v1.1_unigene65901 SustainPine v1.1 436
• AutoFact: zf-CCHC domain containing protein 7.0e-05
Coding
sp_v1.1_unigene67517 SustainPine v1.1 681
• AutoFact: CCHC-type zinc finger protein-like n=2 Tax=Oryza sativa RepID=Q6Z6G7_ORYSJ 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleic acid binding protein 1.49935e-36
N-terminus
sp_v1.1_unigene67740 SustainPine v1.1 495
• AutoFact: Unknown EST 7.0e-11
Putative coding
sp_v1.1_unigene68665 SustainPine v1.1 155
• AutoFact: Unknown EST 4.0e-11
unknown
sp_v1.1_unigene69910 SustainPine v1.1 379
• AutoFact: Unknown EST 4.0e-08
Coding
sp_v1.1_unigene73341 SustainPine v1.1 309
• AutoFact: Unknown EST 3.0e-26
Putative coding
sp_v1.1_unigene73573 SustainPine v1.1 395
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 9.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 4.64927e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain