Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene60981 SustainPine v1.1 361
AutoFact: transducin family protein / WD-40 repeat family protein 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 1.29193e-36
Internal
sp_v1.1_unigene64094 SustainPine v1.1 352
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-08
FL-Next: sp=Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: protein 2.50556e-36
Putative N-terminus
sp_v1.1_unigene64530 SustainPine v1.1 569
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 4.99997e-41
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.72017e-41
N-terminus
sp_v1.1_unigene64992 SustainPine v1.1 857
AutoFact: Polyadenylation factor subunit, putative (EC:2.3.1.48); K04508 transducin (beta)-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene66896 SustainPine v1.1 491
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein 0.0
Internal
sp_v1.1_unigene68462 SustainPine v1.1 415
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
Internal
sp_v1.1_unigene69329 SustainPine v1.1 142
AutoFact: WD40 domain containing protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: angio-associated migratory cell 1.8924e-12
Internal
sp_v1.1_unigene72402 SustainPine v1.1 353
AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTB1_PHYPA 2.0e-14
FL-Next: tr=Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: histone h3 methyltransferase complex and rna cleavage factor ii subunit swd2 3.51951e-14
Putative C-terminus
sp_v1.1_unigene75423 SustainPine v1.1 111
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene76312 SustainPine v1.1 601
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v1.1_unigene77183 SustainPine v1.1 777
AutoFact: F-box and wd40 domain protein, putative 3.0e-35
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box domain containing protein 3.89141e-42
Putative N-terminus
sp_v1.1_unigene77584 SustainPine v1.1 712
AutoFact: WD-repeat protein, putative (EC:2.3.1.48); K10570 DNA excision repair protein ERCC-8 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 2.79158e-36
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain