Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene44366 SustainPine v1.1 395
AutoFact: transducin family protein / WD-40 repeat family protein 1.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.88319e-32
Internal
sp_v1.1_unigene44382 SustainPine v1.1 158
AutoFact: TAF5; TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator; K03130 transcription initiation factor TFIID subunit D4 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: nucleotide binding protein 1.05668e-18
Internal
sp_v1.1_unigene44464 SustainPine v1.1 561
AutoFact: similar to microtubule associated protein Ytm1 0.0
FL-Next: sp=Ribosome biogenesis protein WDR12 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: microtubule associated protein 0.0
Internal
sp_v1.1_unigene44702 SustainPine v1.1 366
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cleavage stimulation factor subunit 1 2.77877e-39
Internal
sp_v1.1_unigene45198 SustainPine v1.1 426
AutoFact: WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 0.0
Internal
sp_v1.1_unigene45818 SustainPine v1.1 710
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene45925 SustainPine v1.1 616
AutoFact: EMB2757 (EMBRYO DEFECTIVE 2757); nucleotide binding 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene46947 SustainPine v1.1 217
AutoFact: WD-repeat protein, putative 3.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 4.47941e-14
Internal
sp_v1.1_unigene47285 SustainPine v1.1 469
AutoFact: WD repeat-containing protein 6.0e-05
Coding
sp_v1.1_unigene53709 SustainPine v1.1 427
AutoFact: Transducin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LZI0_ARALY 3.0e-20
FL-Next: tr=Putative uncharacterized protein AT4g11270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 3.85455e-21
Internal
sp_v1.1_unigene53797 SustainPine v1.1 179
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.38238e-15
Internal
sp_v1.1_unigene54096 SustainPine v1.1 399
AutoFact: COMPASS component SWD2, putative n=1 Tax=Ricinus communis RepID=B9SXL5_RICCO 3.00018e-42
FL-Next: tr=COMPASS component SWD2, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat 4.97461e-42
Putative N-terminus
sp_v1.1_unigene54281 SustainPine v1.1 503
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD7_RICCO 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.08391e-42
C-terminus
sp_v1.1_unigene54705 SustainPine v1.1 286
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 2.20892e-32
Internal
sp_v1.1_unigene54910 SustainPine v1.1 408
AutoFact: WD-repeat protein, putative; K11293 protein HIRA/HIR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone transcription regulator hira 0.0
Internal
sp_v1.1_unigene56168 SustainPine v1.1 346
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9R9H9_RICCO 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.25829e-29
Internal
sp_v1.1_unigene56731 SustainPine v1.1 505
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 7.0e-32
FL-Next: sp=Lissencephaly-1 homolog; Phaeodactylum tricornutum (strain CCAP 1055/1). 0.0
Blast2go: f-box and wd40 domain 4.27523e-36
Internal
sp_v1.1_unigene57521 SustainPine v1.1 630
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 3.04082e-43
Putative C-terminus
sp_v1.1_unigene57779 SustainPine v1.1 325
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v1.1_unigene58332 SustainPine v1.1 437
AutoFact: transducin family protein / WD-40 repeat family protein; K11790 denticleless 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division cycle protein 2.90043e-37
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain