Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene30731 SustainPine v1.1 412
AutoFact: transducin family protein / WD-40 repeat family protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 4.05474e-23
Internal
sp_v1.1_unigene30782 SustainPine v1.1 398
AutoFact: WD-repeat protein, putative; K03364 cell division cycle 20-like protein 1, cofactor of APC complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene31238 SustainPine v1.1 422
AutoFact: CDC20.1; signal transducer; K03363 cell division cycle 20, cofactor of APC complex 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 2.33766e-34
Internal
sp_v1.1_unigene31554 SustainPine v1.1 647
AutoFact: F8K7.7 protein n=2 Tax=Arabidopsis thaliana RepID=Q9XI13_ARATH 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.34454e-40
C-terminus
sp_v1.1_unigene31934 SustainPine v1.1 319
AutoFact: transducin family protein / WD-40 repeat family protein 2.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.45109e-34
Internal
sp_v1.1_unigene32327 SustainPine v1.1 799
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
N-terminus
sp_v1.1_unigene33282 SustainPine v1.1 3841
AutoFact: coatomer beta subunit, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer protein subunit beta 2 (beta prime) 0.0
Complete
sp_v1.1_unigene34190 SustainPine v1.1 591
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wdr13 protein 0.0
Putative N-terminus
sp_v1.1_unigene35131 SustainPine v1.1 631
AutoFact: WD-40 repeat family protein 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 2.58112e-26
N-terminus
sp_v1.1_unigene35391 SustainPine v1.1 924
AutoFact: WD-40 repeat family protein; K11799 WD repeat-containing protein 21A 5.0e-23
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd-40 repeat family protein 1.32095e-35
Complete
sp_v1.1_unigene35612 SustainPine v1.1 1128
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35859 SustainPine v1.1 877
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene36406 SustainPine v1.1 1116
AutoFact: nfc103; MSI type nucleosome/chromatin assembly factor C; K10752 histone-binding protein RBBP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
sp_v1.1_unigene36425 SustainPine v1.1 370
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-05
FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.57953e-30
Internal
sp_v1.1_unigene38506 SustainPine v1.1 900
AutoFact: WD and tetratricopeptide repeat protein, putative; K11807 WD and tetratricopeptide repeats protein 1 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene38686 SustainPine v1.1 562
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: transducin wd-40 repeat 0.0
Internal
sp_v1.1_unigene39806 SustainPine v1.1 295
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cell division cycle protein 4.48448e-22
Internal
sp_v1.1_unigene40566 SustainPine v1.1 409
AutoFact: NV11707; similar to neutral sphingomyelinase (n-smase) activation associated factor fan 1.0e-07
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 3.23194e-28
Internal
sp_v1.1_unigene42303 SustainPine v1.1 536
AutoFact: binding / protein binding / zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene44152 SustainPine v1.1 570
AutoFact: Putative cyclophilin (70.8 kD) (Cyp-15) n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZJ10_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain