Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene26262 SustainPine v1.1 720
AutoFact: Polyadenylation factor subunit, putative (EC:2.3.1.48); K04508 transducin (beta)-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene26423 SustainPine v1.1 1936
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene26713 SustainPine v1.1 631
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g029510; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: transducin wd-40 repeat 0.0
Internal
sp_v1.1_unigene27040 SustainPine v1.1 1553
AutoFact: WD-repeat protein, putative (EC:2.3.1.48); K12857 Prp8 binding protein 0.0
FL-Next: sp=Protein Mut11; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene27438 SustainPine v1.1 528
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pak inhibitor 7.44572e-40
Putative C-terminus
sp_v1.1_unigene27714 SustainPine v1.1 1189
AutoFact: Putative WD-repeat protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZT99_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 0.0
N-terminus
sp_v1.1_unigene27785 SustainPine v1.1 2211
AutoFact: WD-repeat protein, putative 0.0
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene28027 SustainPine v1.1 1692
AutoFact: ubiquitin ligase protein COP1; K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene28154 SustainPine v1.1 1966
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene28375 SustainPine v1.1 614
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9R702_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: cockayne syndrome 1 homolog 0.0
C-terminus
sp_v1.1_unigene28841 SustainPine v1.1 492
AutoFact: Unknown EST 0.0
unknown
sp_v1.1_unigene28849 SustainPine v1.1 1768
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene28981 SustainPine v1.1 1408
AutoFact: WD-repeat protein 4 n=3 Tax=Andropogoneae RepID=B6TK73_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene29053 SustainPine v1.1 1374
AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 0.0
C-terminus
sp_v1.1_unigene29069 SustainPine v1.1 1904
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene29313 SustainPine v1.1 357
AutoFact: ACYPI007324; similar to wd40 protein 6.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: mitogen-activated protein kinase-binding protein 1 4.36916e-25
Internal
sp_v1.1_unigene29364 SustainPine v1.1 1238
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene29523 SustainPine v1.1 2151
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene30485 SustainPine v1.1 1962
AutoFact: plant poly(A)+ RNA export protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rae1-like protein 0.0
Complete
sp_v1.1_unigene30718 SustainPine v1.1 709
AutoFact: Polyadenylation factor subunit, putative (EC:2.3.1.48); K04508 transducin (beta)-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain