Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene18300 SustainPine v1.1 344
AutoFact: WD-repeat protein, putative 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene19064 SustainPine v1.1 613
AutoFact: Alpha-COP n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRR9_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene19964 SustainPine v1.1 1844
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fertilization-independent endosperm protein 0.0
Complete
sp_v1.1_unigene19971 SustainPine v1.1 791
AutoFact: plant poly(A)+ RNA export protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene21255 SustainPine v1.1 3746
AutoFact: coatomer beta subunit, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer protein subunit beta 2 (beta prime) 0.0
Complete
sp_v1.1_unigene21387 SustainPine v1.1 325
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-06
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.53879e-28
Internal
sp_v1.1_unigene21980 SustainPine v1.1 1523
AutoFact: PEX7; PEX7; peroxisome matrix targeting signal-2 binding / protein binding; K13341 peroxin-7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22115 SustainPine v1.1 3861
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v1.1_unigene22551 SustainPine v1.1 2530
AutoFact: WD-repeat protein, putative (EC:2.7.11.7); K08266 G protein beta subunit-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene22721 SustainPine v1.1 2222
AutoFact: Pre-mRNA-splicing factor, putative; K10599 pre-mRNA-processing factor 19 [EC:6.3.2.19] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
Complete
sp_v1.1_unigene22786 SustainPine v1.1 1746
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene23902 SustainPine v1.1 1673
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=2 Tax=fabids RepID=B9S7C0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene23960 SustainPine v1.1 993
AutoFact: AY106137; LOC100282926; K12862 pleiotropic regulator 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prl1 protein 0.0
N-terminus
sp_v1.1_unigene24176 SustainPine v1.1 1943
AutoFact: protein transport protein sec13, putative; K14004 protein transport protein SEC13 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene24317 SustainPine v1.1 1522
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=2 Tax=fabids RepID=B9S7C0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene25004 SustainPine v1.1 1051
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene25639 SustainPine v1.1 1539
AutoFact: nucleotide binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: seh1-like protein 0.0
Complete
sp_v1.1_unigene25761 SustainPine v1.1 1015
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpl protein binding protein homodimerization transcription repressor 0.0
Putative Complete
sp_v1.1_unigene25847 SustainPine v1.1 905
AutoFact: PREDICTED: similar to protein kinase family protein / WD-40 repeat family protein n=1 Tax=Vitis vinifera RepID=UPI0001984267 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.48973e-34
C-terminus
sp_v1.1_unigene25872 SustainPine v1.1 522
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain