Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat 2

Term: IPR019782  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2782 SustainPine v1.1 588
AutoFact: EMB2757 (EMBRYO DEFECTIVE 2757); nucleotide binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene2969 SustainPine v1.1 1139
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
N-terminus
sp_v1.1_unigene3086 SustainPine v1.1 1037
AutoFact: SWDC1501; WD40 repeat protein, COMPASS complex protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
N-terminus
sp_v1.1_unigene3230 SustainPine v1.1 1675
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene3330 SustainPine v1.1 1088
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3390 SustainPine v1.1 1353
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 0.0
C-terminus
sp_v1.1_unigene3639 SustainPine v1.1 3740
AutoFact: WD-40 repeat family protein; K14005 protein transport protein SEC31 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3907 SustainPine v1.1 2424
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene4314 SustainPine v1.1 512
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Internal
sp_v1.1_unigene4385 SustainPine v1.1 2429
AutoFact: actin-related protein 2/3 complex subunit 1B; K05757 actin related protein 2/3 complex, subunit 1A/1B 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arp2 3 protein complex subunit p41 0.0
Complete
sp_v1.1_unigene4420 SustainPine v1.1 451
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cleavage stimulation 50 kda expressed 0.0
Internal
sp_v1.1_unigene4643 SustainPine v1.1 1777
AutoFact: F-box and wd40 domain protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g21040-like protein 0.0
Putative Complete
sp_v1.1_unigene4765 SustainPine v1.1 2012
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene4887 SustainPine v1.1 2156
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Complete
sp_v1.1_unigene4972 SustainPine v1.1 851
AutoFact: Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRV1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 methyltransferase complex and rna cleavage factor ii subunit swd2 0.0
Putative C-terminus
sp_v1.1_unigene6428 SustainPine v1.1 548
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Internal
sp_v1.1_unigene6497 SustainPine v1.1 1107
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene6575 SustainPine v1.1 1693
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene6613 SustainPine v1.1 1426
AutoFact: [R] COG2319 FOG: WD40 repeat 9.0e-07
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene6647 SustainPine v1.1 1343
AutoFact: PHF1; PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1); nucleotide binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain