Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat, subgroup

Term: IPR019781  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene28154 SustainPine v1.1 1966
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene28375 SustainPine v1.1 614
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9R702_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: cockayne syndrome 1 homolog 0.0
C-terminus
sp_v1.1_unigene28422 SustainPine v1.1 413
AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-05
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
sp_v1.1_unigene28849 SustainPine v1.1 1768
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene28981 SustainPine v1.1 1408
AutoFact: WD-repeat protein 4 n=3 Tax=Andropogoneae RepID=B6TK73_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene29053 SustainPine v1.1 1374
AutoFact: [R] COG2319 FOG: WD40 repeat 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 0.0
C-terminus
sp_v1.1_unigene29069 SustainPine v1.1 1904
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene29313 SustainPine v1.1 357
AutoFact: ACYPI007324; similar to wd40 protein 6.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: mitogen-activated protein kinase-binding protein 1 4.36916e-25
Internal
sp_v1.1_unigene29364 SustainPine v1.1 1238
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene29523 SustainPine v1.1 2151
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene29987 SustainPine v1.1 2181
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene30485 SustainPine v1.1 1962
AutoFact: plant poly(A)+ RNA export protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rae1-like protein 0.0
Complete
sp_v1.1_unigene30617 SustainPine v1.1 451
AutoFact: NACHT and WD repeat domain-containing protein 1-like 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family 0.0
Internal
sp_v1.1_unigene30718 SustainPine v1.1 709
AutoFact: Polyadenylation factor subunit, putative (EC:2.3.1.48); K04508 transducin (beta)-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene30731 SustainPine v1.1 412
AutoFact: transducin family protein / WD-40 repeat family protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 4.05474e-23
Internal
sp_v1.1_unigene30782 SustainPine v1.1 398
AutoFact: WD-repeat protein, putative; K03364 cell division cycle 20-like protein 1, cofactor of APC complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene31238 SustainPine v1.1 422
AutoFact: CDC20.1; signal transducer; K03363 cell division cycle 20, cofactor of APC complex 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 2.33766e-34
Internal
sp_v1.1_unigene31554 SustainPine v1.1 647
AutoFact: F8K7.7 protein n=2 Tax=Arabidopsis thaliana RepID=Q9XI13_ARATH 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.34454e-40
C-terminus
sp_v1.1_unigene31934 SustainPine v1.1 319
AutoFact: transducin family protein / WD-40 repeat family protein 2.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.45109e-34
Internal
sp_v1.1_unigene32327 SustainPine v1.1 799
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain