Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat, subgroup

Term: IPR019781  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene14491 SustainPine v1.1 455
AutoFact: transducin family protein / WD-40 repeat family protein 1.0e-08
FL-Next: tr=At2g26490; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v1.1_unigene14853 SustainPine v1.1 1613
AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=6 Tax=rosids RepID=GBLP_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor of activated protein kinase c component of 40s small ribosomal subunit 0.0
Complete
sp_v1.1_unigene15638 SustainPine v1.1 1565
AutoFact: mitotic checkpoint protein bub3, putative; K02180 cell cycle arrest protein BUB3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
Complete
sp_v1.1_unigene15896 SustainPine v1.1 2222
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15967 SustainPine v1.1 841
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene16487 SustainPine v1.1 1368
AutoFact: protein transport protein sec13, putative; K14004 protein transport protein SEC13 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec13 family protein 0.0
Complete
sp_v1.1_unigene16609 SustainPine v1.1 1100
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T0U7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at3g62770 f26k9_200 0.0
N-terminus
sp_v1.1_unigene16822 SustainPine v1.1 2326
AutoFact: AY106137; LOC100282926; K12862 pleiotropic regulator 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prl1 protein 0.0
Complete
sp_v1.1_unigene17506 SustainPine v1.1 912
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
Putative Complete
sp_v1.1_unigene17581 SustainPine v1.1 1667
AutoFact: transducin family protein / WD-40 repeat family protein; K12880 THO complex subunit 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene18164 SustainPine v1.1 2435
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene18300 SustainPine v1.1 344
AutoFact: WD-repeat protein, putative 0.0
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene19064 SustainPine v1.1 613
AutoFact: Alpha-COP n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRR9_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene19964 SustainPine v1.1 1844
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fertilization-independent endosperm protein 0.0
Complete
sp_v1.1_unigene21255 SustainPine v1.1 3746
AutoFact: coatomer beta subunit, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer protein subunit beta 2 (beta prime) 0.0
Complete
sp_v1.1_unigene21387 SustainPine v1.1 325
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-06
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.53879e-28
Internal
sp_v1.1_unigene21547 SustainPine v1.1 880
AutoFact: predicted protein; K11805 WD repeat-containing protein 68 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene21980 SustainPine v1.1 1523
AutoFact: PEX7; PEX7; peroxisome matrix targeting signal-2 binding / protein binding; K13341 peroxin-7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22115 SustainPine v1.1 3861
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v1.1_unigene22551 SustainPine v1.1 2530
AutoFact: WD-repeat protein, putative (EC:2.7.11.7); K08266 G protein beta subunit-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain