Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat, subgroup

Term: IPR019781  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene6497 SustainPine v1.1 1107
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene6575 SustainPine v1.1 1693
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene6613 SustainPine v1.1 1426
AutoFact: [R] COG2319 FOG: WD40 repeat 9.0e-07
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene6647 SustainPine v1.1 1343
AutoFact: PHF1; PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1); nucleotide binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1 0.0
C-terminus
sp_v1.1_unigene6666 SustainPine v1.1 1210
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene7039 SustainPine v1.1 2023
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7474 SustainPine v1.1 590
AutoFact: transducin family protein / WD-40 repeat family protein 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.41515e-27
Putative C-terminus
sp_v1.1_unigene7616 SustainPine v1.1 1452
AutoFact: transducin family protein / WD-40 repeat family protein; K13124 mitogen-activated protein kinase organizer 1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene7732 SustainPine v1.1 1375
AutoFact: WD-repeat protein, putative; K03364 cell division cycle 20-like protein 1, cofactor of APC complex 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7734 SustainPine v1.1 1887
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7929 SustainPine v1.1 1216
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJW7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding 0.0
Putative N-terminus
sp_v1.1_unigene8237 SustainPine v1.1 981
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 0.0
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene8357 SustainPine v1.1 908
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene8438 SustainPine v1.1 1467
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9REV1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene8603 SustainPine v1.1 792
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene9358 SustainPine v1.1 1387
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Complete
sp_v1.1_unigene9533 SustainPine v1.1 447
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 5.01979e-13
Internal
sp_v1.1_unigene9750 SustainPine v1.1 2030
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene10138 SustainPine v1.1 2128
AutoFact: WD-40 repeat-containing protein MSI1 n=13 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
sp_v1.1_unigene10242 SustainPine v1.1 775
AutoFact: similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain