Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene36406 SustainPine v1.1 1116
AutoFact: nfc103; MSI type nucleosome/chromatin assembly factor C; K10752 histone-binding protein RBBP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
sp_v1.1_unigene36425 SustainPine v1.1 370
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-05
FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.57953e-30
Internal
sp_v1.1_unigene38441 SustainPine v1.1 585
AutoFact: Transducin family protein n=1 Tax=Brassica oleracea RepID=B2D2H3_BRAOL 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 4.10626e-17
Putative N-terminus
sp_v1.1_unigene38506 SustainPine v1.1 900
AutoFact: WD and tetratricopeptide repeat protein, putative; K11807 WD and tetratricopeptide repeats protein 1 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene38686 SustainPine v1.1 562
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: transducin wd-40 repeat 0.0
Internal
sp_v1.1_unigene39806 SustainPine v1.1 295
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cell division cycle protein 4.48448e-22
Internal
sp_v1.1_unigene40566 SustainPine v1.1 409
AutoFact: NV11707; similar to neutral sphingomyelinase (n-smase) activation associated factor fan 1.0e-07
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 3.23194e-28
Internal
sp_v1.1_unigene42303 SustainPine v1.1 536
AutoFact: binding / protein binding / zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene44152 SustainPine v1.1 570
AutoFact: Putative cyclophilin (70.8 kD) (Cyp-15) n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZJ10_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene44366 SustainPine v1.1 395
AutoFact: transducin family protein / WD-40 repeat family protein 1.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.88319e-32
Internal
sp_v1.1_unigene44382 SustainPine v1.1 158
AutoFact: TAF5; TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator; K03130 transcription initiation factor TFIID subunit D4 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: nucleotide binding protein 1.05668e-18
Internal
sp_v1.1_unigene44464 SustainPine v1.1 561
AutoFact: similar to microtubule associated protein Ytm1 0.0
FL-Next: sp=Ribosome biogenesis protein WDR12 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: microtubule associated protein 0.0
Internal
sp_v1.1_unigene44702 SustainPine v1.1 366
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cleavage stimulation factor subunit 1 2.77877e-39
Internal
sp_v1.1_unigene45198 SustainPine v1.1 426
AutoFact: WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat family protein 0.0
Internal
sp_v1.1_unigene45818 SustainPine v1.1 710
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene45925 SustainPine v1.1 616
AutoFact: EMB2757 (EMBRYO DEFECTIVE 2757); nucleotide binding 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene46947 SustainPine v1.1 217
AutoFact: WD-repeat protein, putative 3.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 4.47941e-14
Internal
sp_v1.1_unigene47285 SustainPine v1.1 469
AutoFact: WD repeat-containing protein 6.0e-05
Coding
sp_v1.1_unigene53709 SustainPine v1.1 427
AutoFact: Transducin family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LZI0_ARALY 3.0e-20
FL-Next: tr=Putative uncharacterized protein AT4g11270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 3.85455e-21
Internal
sp_v1.1_unigene53797 SustainPine v1.1 179
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.38238e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain