Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene69329 SustainPine v1.1 142
AutoFact: WD40 domain containing protein 3.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: angio-associated migratory cell 1.8924e-12
Internal
sp_v1.1_unigene75423 SustainPine v1.1 111
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v1.1_unigene76312 SustainPine v1.1 601
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
sp_v1.1_unigene77183 SustainPine v1.1 777
AutoFact: F-box and wd40 domain protein, putative 3.0e-35
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box domain containing protein 3.89141e-42
Putative N-terminus
sp_v1.1_unigene77584 SustainPine v1.1 712
AutoFact: WD-repeat protein, putative (EC:2.3.1.48); K10570 DNA excision repair protein ERCC-8 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 2.79158e-36
N-terminus
sp_v1.1_unigene81577 SustainPine v1.1 656
AutoFact: TPR1; TPR1 (TOPLESS-RELATED 1) 2.8026e-45
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tpl protein binding protein homodimerization transcription repressor 0.0
Internal
sp_v1.1_unigene82502 SustainPine v1.1 2550
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative; K03253 translation initiation factor eIF-3 subunit 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene82582 SustainPine v1.1 1156
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative; K03253 translation initiation factor eIF-3 subunit 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene83564 SustainPine v1.1 646
AutoFact: WD-40 repeat family protein; K11799 WD repeat-containing protein 21A 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 1.09161e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain