Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene35131 SustainPine v1.1 631
AutoFact: WD-40 repeat family protein 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 2.58112e-26
N-terminus
sp_v1.1_unigene35391 SustainPine v1.1 924
AutoFact: WD-40 repeat family protein; K11799 WD repeat-containing protein 21A 5.0e-23
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd-40 repeat family protein 1.32095e-35
Complete
sp_v1.1_unigene35479 SustainPine v1.1 888
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RVI4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 0.0
Internal
sp_v1.1_unigene35612 SustainPine v1.1 1128
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35859 SustainPine v1.1 877
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35962 SustainPine v1.1 517
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene35994 SustainPine v1.1 372
AutoFact: WD-repeat protein, putative 2.0e-33
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.05258e-34
Internal
sp_v1.1_unigene36406 SustainPine v1.1 1116
AutoFact: nfc103; MSI type nucleosome/chromatin assembly factor C; K10752 histone-binding protein RBBP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
sp_v1.1_unigene36425 SustainPine v1.1 370
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-05
FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.57953e-30
Internal
sp_v1.1_unigene36777 SustainPine v1.1 529
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-30
FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: ribosome biogenesis protein 6.73436e-41
Internal
sp_v1.1_unigene36876 SustainPine v1.1 858
AutoFact: nucleotide binding; K03351 anaphase-promoting complex subunit 4 0.0
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex 0.0
Internal
sp_v1.1_unigene37402 SustainPine v1.1 571
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: guanine nucleotide-binding protein 0.0
Internal
sp_v1.1_unigene38441 SustainPine v1.1 585
AutoFact: Transducin family protein n=1 Tax=Brassica oleracea RepID=B2D2H3_BRAOL 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 4.10626e-17
Putative N-terminus
sp_v1.1_unigene38506 SustainPine v1.1 900
AutoFact: WD and tetratricopeptide repeat protein, putative; K11807 WD and tetratricopeptide repeats protein 1 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene38588 SustainPine v1.1 451
AutoFact: 5PTASE13; inositol or phosphatidylinositol phosphatase 5.0e-37
FL-Next: Isoform 2 of Type I inositol-1,4,5-trisphosphate 5-phosphatase 13 OS=Arabidopsis thaliana GN=5PTASE13 0.0
Blast2go: endonuclease exonuclease phosphatase family protein 5.33362e-39
Internal
sp_v1.1_unigene38686 SustainPine v1.1 562
AutoFact: Os02g0722800 protein n=2 Tax=Oryza sativa RepID=Q6Z5M6_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: transducin wd-40 repeat 0.0
Internal
sp_v1.1_unigene39763 SustainPine v1.1 257
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: breast carcinoma amplified 3.29377e-28
Internal
sp_v1.1_unigene39806 SustainPine v1.1 295
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cell division cycle protein 4.48448e-22
Internal
sp_v1.1_unigene40566 SustainPine v1.1 409
AutoFact: NV11707; similar to neutral sphingomyelinase (n-smase) activation associated factor fan 1.0e-07
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 3.23194e-28
Internal
sp_v1.1_unigene42303 SustainPine v1.1 536
AutoFact: binding / protein binding / zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain