Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: WD40 repeat-like-containing domain

Term: IPR011046  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene30718 SustainPine v1.1 709
AutoFact: Polyadenylation factor subunit, putative (EC:2.3.1.48); K04508 transducin (beta)-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene30731 SustainPine v1.1 412
AutoFact: transducin family protein / WD-40 repeat family protein 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 4.05474e-23
Internal
sp_v1.1_unigene31554 SustainPine v1.1 647
AutoFact: F8K7.7 protein n=2 Tax=Arabidopsis thaliana RepID=Q9XI13_ARATH 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.34454e-40
C-terminus
sp_v1.1_unigene31934 SustainPine v1.1 319
AutoFact: transducin family protein / WD-40 repeat family protein 2.0e-31
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.45109e-34
Internal
sp_v1.1_unigene32327 SustainPine v1.1 799
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
N-terminus
sp_v1.1_unigene33282 SustainPine v1.1 3841
AutoFact: coatomer beta subunit, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer protein subunit beta 2 (beta prime) 0.0
Complete
sp_v1.1_unigene34190 SustainPine v1.1 591
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wdr13 protein 0.0
Putative N-terminus
sp_v1.1_unigene34294 SustainPine v1.1 365
AutoFact: ATVPS11; binding / protein binding / transporter/ zinc ion binding 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring zinc finger-containing protein 5.81453e-38
N-terminus
sp_v1.1_unigene35131 SustainPine v1.1 631
AutoFact: WD-40 repeat family protein 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 2.58112e-26
N-terminus
sp_v1.1_unigene35391 SustainPine v1.1 924
AutoFact: WD-40 repeat family protein; K11799 WD repeat-containing protein 21A 5.0e-23
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd-40 repeat family protein 1.32095e-35
Complete
sp_v1.1_unigene35479 SustainPine v1.1 888
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RVI4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box and wd40 domain 0.0
Internal
sp_v1.1_unigene35612 SustainPine v1.1 1128
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35859 SustainPine v1.1 877
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35962 SustainPine v1.1 517
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene35994 SustainPine v1.1 372
AutoFact: WD-repeat protein, putative 2.0e-33
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 3.05258e-34
Internal
sp_v1.1_unigene36406 SustainPine v1.1 1116
AutoFact: nfc103; MSI type nucleosome/chromatin assembly factor C; K10752 histone-binding protein RBBP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
C-terminus
sp_v1.1_unigene36777 SustainPine v1.1 529
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-30
FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: ribosome biogenesis protein 6.73436e-41
Internal
sp_v1.1_unigene37402 SustainPine v1.1 571
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: guanine nucleotide-binding protein 0.0
Internal
sp_v1.1_unigene38441 SustainPine v1.1 585
AutoFact: Transducin family protein n=1 Tax=Brassica oleracea RepID=B2D2H3_BRAOL 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 4.10626e-17
Putative N-terminus
sp_v1.1_unigene38506 SustainPine v1.1 900
AutoFact: WD and tetratricopeptide repeat protein, putative; K11807 WD and tetratricopeptide repeats protein 1 0.0
FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain