Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat-like-containing domain

Term: IPR011046  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene8438 SustainPine v1.1 1467
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9REV1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene8603 SustainPine v1.1 792
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene9358 SustainPine v1.1 1387
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Complete
sp_v1.1_unigene9533 SustainPine v1.1 447
AutoFact: F-box and wd40 domain protein, putative (EC:2.7.11.7) 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 5.01979e-13
Internal
sp_v1.1_unigene10138 SustainPine v1.1 2128
AutoFact: WD-40 repeat-containing protein MSI1 n=13 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
sp_v1.1_unigene10242 SustainPine v1.1 775
AutoFact: similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene10297 SustainPine v1.1 748
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pak1 interacting protein 1 1.31443e-38
Putative C-terminus
sp_v1.1_unigene10983 SustainPine v1.1 469
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTB5_RICCO 5.0e-18
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 8.81668e-18
N-terminus
sp_v1.1_unigene11002 SustainPine v1.1 739
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set1 complex component swd2 0.0
C-terminus
sp_v1.1_unigene11179 SustainPine v1.1 801
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDVA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 55 kda b regulatory subunit of phosphatase 2a 0.0
Putative Complete
sp_v1.1_unigene11287 SustainPine v1.1 820
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Putative C-terminus
sp_v1.1_unigene11375 SustainPine v1.1 1303
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11393 SustainPine v1.1 1462
AutoFact: WD40 repeat-containing protein 3.0e-06
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: predicted protein [Hordeum vulgare subsp. vulgare] 0.0
C-terminus
sp_v1.1_unigene11546 SustainPine v1.1 1436
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tomosyn-like protein 0.0
Internal
sp_v1.1_unigene11573 SustainPine v1.1 476
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDF9_RICCO 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding 2.70451e-43
Putative C-terminus
sp_v1.1_unigene11617 SustainPine v1.1 905
AutoFact: LEC14B protein, putative; K11801 WD repeat-containing protein 23 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11836 SustainPine v1.1 1810
AutoFact: Prolactin regulatory element-binding protein, putative (EC:1.3.1.74); K14003 prolactin regulatory element-binding protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11886 SustainPine v1.1 989
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 0.0
Internal
sp_v1.1_unigene11933 SustainPine v1.1 1243
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene12496 SustainPine v1.1 353
AutoFact: similar to HSPC049 protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: wd repeat-containing protein 91 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain