Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat-like-containing domain

Term: IPR011046  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2458 SustainPine v1.1 1333
AutoFact: WDR2; WD repeat 2; K11805 WD repeat-containing protein 68 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene2660 SustainPine v1.1 1824
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene2782 SustainPine v1.1 588
AutoFact: EMB2757 (EMBRYO DEFECTIVE 2757); nucleotide binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene2969 SustainPine v1.1 1139
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
N-terminus
sp_v1.1_unigene3086 SustainPine v1.1 1037
AutoFact: SWDC1501; WD40 repeat protein, COMPASS complex protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
N-terminus
sp_v1.1_unigene3088 SustainPine v1.1 2954
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q7XA22_SOLBU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpl protein binding protein homodimerization transcription repressor 0.0
Complete
sp_v1.1_unigene3230 SustainPine v1.1 1675
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene3330 SustainPine v1.1 1088
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3390 SustainPine v1.1 1353
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd-40 repeat family protein 0.0
C-terminus
sp_v1.1_unigene3639 SustainPine v1.1 3740
AutoFact: WD-40 repeat family protein; K14005 protein transport protein SEC31 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3650 SustainPine v1.1 872
AutoFact: SDF domain containing protein 8.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleotide binding 1.00473e-42
C-terminus
sp_v1.1_unigene3826 SustainPine v1.1 1790
AutoFact: ribosome biogenesis protein bop1, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Putative Complete
sp_v1.1_unigene3907 SustainPine v1.1 2424
AutoFact: U3 small nucleolar RNA-associated protein, putative (EC:2.7.11.7) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative Complete
sp_v1.1_unigene3981 SustainPine v1.1 1530
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9T585_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene4314 SustainPine v1.1 512
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Internal
sp_v1.1_unigene4385 SustainPine v1.1 2429
AutoFact: actin-related protein 2/3 complex subunit 1B; K05757 actin related protein 2/3 complex, subunit 1A/1B 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arp2 3 protein complex subunit p41 0.0
Complete
sp_v1.1_unigene4420 SustainPine v1.1 451
AutoFact: Cleavage stimulation factor 50 kDa subunit, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cleavage stimulation 50 kda expressed 0.0
Internal
sp_v1.1_unigene4546 SustainPine v1.1 2288
AutoFact: VID27 domain containing protein 1.96182e-44
FL-Next: sp=Protein CYPRO4; Cynara cardunculus (Cardoon). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene4643 SustainPine v1.1 1777
AutoFact: F-box and wd40 domain protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g21040-like protein 0.0
Putative Complete
sp_v1.1_unigene4647 SustainPine v1.1 626
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-26
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleotide binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain