Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11002 SustainPine v1.1 739
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set1 complex component swd2 0.0
C-terminus
sp_v1.1_unigene11287 SustainPine v1.1 820
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Putative C-terminus
sp_v1.1_unigene11375 SustainPine v1.1 1303
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11546 SustainPine v1.1 1436
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tomosyn-like protein 0.0
Internal
sp_v1.1_unigene11573 SustainPine v1.1 476
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDF9_RICCO 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding 2.70451e-43
Putative C-terminus
sp_v1.1_unigene11574 SustainPine v1.1 2105
AutoFact: transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 0.0
Putative Complete
sp_v1.1_unigene11617 SustainPine v1.1 905
AutoFact: LEC14B protein, putative; K11801 WD repeat-containing protein 23 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11836 SustainPine v1.1 1810
AutoFact: Prolactin regulatory element-binding protein, putative (EC:1.3.1.74); K14003 prolactin regulatory element-binding protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11886 SustainPine v1.1 989
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 0.0
Internal
sp_v1.1_unigene11933 SustainPine v1.1 1243
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11943 SustainPine v1.1 786
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding 0.0
Complete
sp_v1.1_unigene12496 SustainPine v1.1 353
AutoFact: similar to HSPC049 protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: wd repeat-containing protein 91 0.0
Internal
sp_v1.1_unigene12637 SustainPine v1.1 1708
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat 0.0
Putative Complete
sp_v1.1_unigene12812 SustainPine v1.1 2285
AutoFact: similar to transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein wd-40 repeat family protein 0.0
Complete
sp_v1.1_unigene13023 SustainPine v1.1 998
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene13346 SustainPine v1.1 1365
AutoFact: similar to transducin family protein / WD-40 repeat family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide binding protein 0.0
C-terminus
sp_v1.1_unigene14399 SustainPine v1.1 1198
AutoFact: WDR2; WD repeat 2; K11805 WD repeat-containing protein 68 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene14491 SustainPine v1.1 455
AutoFact: transducin family protein / WD-40 repeat family protein 1.0e-08
FL-Next: tr=At2g26490; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v1.1_unigene14853 SustainPine v1.1 1613
AutoFact: Guanine nucleotide-binding protein subunit beta-like protein n=6 Tax=rosids RepID=GBLP_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor of activated protein kinase c component of 40s small ribosomal subunit 0.0
Complete
sp_v1.1_unigene15638 SustainPine v1.1 1565
AutoFact: mitotic checkpoint protein bub3, putative; K02180 cell cycle arrest protein BUB3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain